It seems that this line:
<merge key="input.x11_options.ButtonMapping" type="string">1 8 3 2
9</merge>
in my HAL policy file was the cause of the problem. Scrolling up was
emulating a click of button 4, which was getting re-mapped to button 2,
which caused a paste event rather then a scroll event. I have removed
that line from my policy file and it works fine now.
Marking invalid.
** Changed in: xorg-server (Ubuntu)
Status: New => Invalid
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Emulation of middle button and scroll wheel is broken.
https://bugs.launchpad.net/bugs/326769
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