I thought you were done with sum Jimmy! :)

Anyways, I have upgraded to Intrepid since I had this problem. With
Intrepid's version (1.9.11-1) I have changed the resolution/color depth,
the usplash theme, menu colors, and recently checked one (1) misc boot
option all without any problems. Post-config took maybe 30-45 seconds on
my latest changes.

Back to your question: I may have had my Vista boot option in the wrong
place in menu.lst, but cannot verify that this is true as I no longer
have my backups from Hardy, but any custom options would have been wiped
by update-grub (or whatever is run to update menu.lst) and this never
happened. So, I do not believe I manually edited any of the
Automagically created kernel list. Besides, any changes needed can
easily be made to other sections/options of menu.lst and update-grub
will pull them to the automagic list.

Just to test further, I removed the recovery mode check box, closed sum
to apply the changes (they went quick, much quicker than the 30-45 secs
for the boot option change earlier), re-ran to verify the new list of
kernels, re-checked the recovery mode option, closed to apply, re-ran to
check: everything went A-OK.

Then, to test the theory that the more time sum is opened and running
the longer it takes to apply changes: I made no changes, just left the
program running for 5-7 minutes clicking around occasionally, closed it,
post-config ran for at least 40seconds as my 40pixel 1000ms sysmon gauge
was completely full with 100% cpu (75%user 25%system). But, it did
finish eventually and exited happily.


Basically, a good program, a little finicky, but it only needs run once every 
blue moon; so, not really a problem in my eyes now that it's working better 
under Intrepid.

-- 
[Hardy] startupmanager-1.9.10-2 hangs at "Performing post-configureation tasks"
https://bugs.launchpad.net/bugs/213006
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