i have the same problem but i have only 1 sata hd (3 ntfs partitions and 1 ext 
3)....
the problem happen when i make any thing that deals with the hard disk (either 
ntfs or ext3 partition)...
i also noticed that when ubuntu starts the hdd is configured for udma/133 and 
every thing is perfect but after playing a video or using firefox or any thing 
that performs io operations....it decreases till reaching udma/33 and then 
ubuntu freezes completely...
i have this problem from ubuntu 8.04 ...please help :(

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2.6.24-19-generic libata soft resetting link every 30 secs when under heavy load
https://bugs.launchpad.net/bugs/270794
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