I tracked this down to the fact that dovecot has apparently changed the
default subscriptions file for the maildir backend from .subscriptions
to subscriptions.  I can't find _any_ documentation of this change,
never mind the BIG FLASHING WARNING stuff I would expect.  Given that
it's too late to revert this change, I think we need to either have
dovecot automigrate old '.subscriptions' files or look at both (though
then you get into fun issues of which is canonical).

** Changed in: dovecot (Ubuntu)
       Status: Needs Info => Confirmed

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sub-folders disappear on upgrade from breezy to dapper
https://launchpad.net/bugs/51038

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