Hi,
Does any of you use Pysces? I need to run some simulations and
unfortunately I cannot create plot. After importing Pysces it claims
that Matplotlib is not available, but it's installed for sure since I
can import matplotlib. When I try to do plot after simulation:
---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
/home/mateusz/Pysces/<ipython-input-11-d979049976f5> in <module>()
----> 1 mod.doSimPlot()
/usr/lib/python2.7/site-packages/pysces/PyscesModel.pyc in
doSimPlot(self, end, points, plot, fmt, filename)
5584 self.sim_points = points
5585 self.Simulate()
-> 5586 self.SimPlot(plot=plot, format=fmt, filename=filename)
5587
5588 def doSimPerturb(self,pl,end):
/usr/lib/python2.7/site-packages/pysces/PyscesModel.pyc in SimPlot(self,
plot, filename, title, log, format)
6955 data, labels = self.data_sim.getSimData(*plot,
**kwargs)
6956 del allowedplots
-> 6957 plt.plotLines(data, 0, range(1, data.shape[1]),
titles=labels, formats=[format])
6958 # set the x-axis range so that it is original range +
0.2*sim_end
6959 # this is a sceintifcally dtermned amount of space that
is needed for the title at the
AttributeError: 'NoneType' object has no attribute 'plotLines'
I've already exported matplotlib localization in ipython by:
sys.path.append("/usr/lib/python2.7/site-packages/")
Thank you in advance for any help!
Cheers,
Mateusz
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