Hi Phil,
From a distance, it feels like there may be a mismatch in Slurm
versions (an auxiliary build hiding out somewhere?). You might try
something like
$ which srun; srun which srun
Just to confirm that both the submit and execute nodes are running the
same slurm instance.
Andy
On 12/7/2020 9:19 AM, Yuengling, Philip J. wrote:
Thanks Andy,
Slurm was compiled with --with-pmix=/share/local/pmix-3.2.1. The build
of pmix isinstalled under /share/local/pmix-3.2.1 which is an NFS
share across all the nodes. I should also note I used devtoolset-10
(gcc 10) on RHEL7 and confirmed that everything was compiled with that
version of compiler.
I also set LD_LIBRARY_PATH to include /share/local/pmix-3.2.1
Cheers!
Phil
*From: *slurm-users <slurm-users-boun...@lists.schedmd.com> on behalf
of Andy Riebs <a...@candooz.com>
*Reply-To: *"a...@candooz.com" <a...@candooz.com>, Slurm User
Community List <slurm-users@lists.schedmd.com>
*Date: *Friday, December 4, 2020 at 3:07 PM
*To: *"slurm-users@lists.schedmd.com" <slurm-users@lists.schedmd.com>
*Subject: *[EXT] Re: [slurm-users] pmix issue
*APL external email warning: *Verify sender
slurm-users-boun...@lists.schedmd.com before clicking links or attachments
Also, Slurm was built with "/fs/local/pmix-3.2.1" -- does that
translate well to "/share/local/pmix-3.2.1"?
Andy
On 12/4/2020 2:59 PM, Andy Riebs wrote:
Are you sure that /share/local/pmix-3.2.1 exists on the compute nodes?
On 12/4/2020 2:54 PM, Yuengling, Philip J. wrote:
Hi everyone,
I’ve been having difficulty getting the --mpi=pmix_v3 option
to work for me. I can get --mpi=pmi2 to work ok, but I really
want to understand what I’m doing wrong here. Everything
seems to build ok.
$ srun --mpi=list
srun: MPI types are...
srun: pmix
srun: pmix_v3
srun: cray_shasta
srun: none
srun: pmi2
$ srun --mpi=pmix_v3 -N5 date
srun: error: task 1 launch failed: Invalid MPI plugin name
srun: error: task 2 launch failed: Invalid MPI plugin name
srun: error: task 3 launch failed: Invalid MPI plugin name
srun: error: task 4 launch failed: Invalid MPI plugin name
srun: error: task 0 launch failed: Invalid MPI plugin name
$ srun --mpi=pmi2 -N5 date
Fri Dec 4 13:52:39 EST 2020
Fri Dec 4 13:52:39 EST 2020
Fri Dec 4 13:52:39 EST 2020
Fri Dec 4 13:52:39 EST 2020
Fri Dec 4 13:52:39 EST 2020
openpmix:
CC=/opt/rh/devtoolset-10/root/usr/bin/gcc ./configure
--prefix=/share/local/pmix-3.2.1
--with-hwloc=/share/local/hwloc-2.4.0
Slurm 20.11.0:
rpmbuild --define "_with_pmix
--with-pmix=/fs/local/pmix-3.2.1" -ta slurm-20.11.0.tar.bz2
From config.log:
./configure --build=x86_64-redhat-linux-gnu
--host=x86_64-redhat-linux-gnu --program-prefix=
--disable-dependency-tracking --prefix=/usr --exec-prefix=/usr
--bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc/slurm
--datadir=/usr/share --includedir=/usr/include
--libdir=/usr/lib64 --libexecdir=/usr/libexec
--localstatedir=/var --sharedstatedir=/var/lib
--mandir=/usr/share/man --infodir=/usr/share/info
--with-pmix=/fs/local/pmix-3.2.1 --disable-slurmrestd
Open MP 4.0.5:
./configure '--prefix=/share/openmpi-4.0.5' '--with-cuda'
'--with-pmix=/share/local/pmix-3.2.1' '--with-pmi=/usr'
'--with-slurm' '--without-ucx' '--without-verbs'
--
Philip J. Yuengling
Johns Hopkins University
-->
