We had issues getting TMPDIR to work as well. We finally did this in our
prolog:
export SLURM_TMPDIR="/tmp/slurm/${SLURM_JOB_ID}"
This works.
-Roger
From: slurm-users <[email protected]> On Behalf Of
Ellestad, Erik
Sent: Tuesday, May 12, 2020 10:40 AM
To: [email protected]
Subject: [slurm-users] Reset TMPDIR for All Jobs
I was wanted to set TMPDIR from /tmp to a per job directory I create in local
/scratch/$SLURM_JOB_ID (for example)
This bug suggests I should be able to do this in a task-prolog.
https://bugs.schedmd.com/show_bug.cgi?id=2664
However adding the following to task-prolog doesn't seem to affect the
variables the job script is running with.
unset TMPDIR
export TMPDIR=/scratch/$SLURM_JOB_ID
It does work if it is done in the job script, rather than the task-prolog.
Am I missing something?
Erik
--
Erik Ellestad
Wynton Cluster SysAdmin
UCSF
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