Hi All,
New using migrating from uge/sge, I'm baffled by the ExitCode recording into slurmdb; not sure if this is 'new user' issue or bug, so exposing it here first. Running simple sbatch scripts with these headers relevant #!/bin/bash #SBATCH --mail-user <me>@<work> #SBATCH --mail-type END #SBATCH -J T_113491_<redacted>_20150522 The sbatch calls various tools, and terminally a 'completion_reporter' bash script reporting whether all calls have proceeded to completion. If not the return_code from that script is passed into the sbatch script as an exit command; the expectation is that the return code for the sbatch script in these circumstances is that from the completion_reporter'. That return_code is 141 GOOD The emails received have subject line consistent with expectations 'Slurm Job_id=196 Name=T_113491_<redacted>_20150522 Ended, Run time 00:00:24, FAILED, ExitCode 141' UNEXPECTED However sacct output is not consistent with expectations... $ sacct -j 196 ------------ ---------- ---------- ---------- ---------- ---------- -------- 196 T_113491_+ all_slt_l+ slt 1 FAILED 13:0 196.batch batch slt 1 FAILED 13:0 I've spent some time reading through the (excellent, frankly) documentation for sbatch and job_exit_code and while learning a great deal nothing has explained with anomaly. Incidentally I expected to be able to use scontrol as below; any pointers on the unexpected outcome would be welcome $ scontrol show step 196.batch Job step 196.0 not found We have put a fair bit of work into informatively coding our fail exit_codes so suggestions as to what's going on here would be welcome. Thanks in advance Matt ************************************************************************** The information contained in the EMail and any attachments is confidential and intended solely and for the attention and use of the named addressee(s). It may not be disclosed to any other person without the express authority of Public Health England, or the intended recipient, or both. If you are not the intended recipient, you must not disclose, copy, distribute or retain this message or any part of it. This footnote also confirms that this EMail has been swept for computer viruses by Symantec.Cloud, but please re-sweep any attachments before opening or saving. http://www.gov.uk/PHE **************************************************************************
