Re: set up tomcat for biopython

2010-05-11 Thread Felix Schumacher
Am Dienstag, den 11.05.2010, 17:36 +0200 schrieb Silvio Tschapke: > Hi all, > > how do I configure tomcat that it finds the biopython libaries? > Biopython is not included in jython.jar (which I have moved into the > tomcat/lib folder. > Biopython installs itself into the python26/lib/side-package

Re: set up tomcat for biopython

2010-05-11 Thread André Warnier
Silvio Tschapke wrote: Ok, I will try this. Thanks a lot for your help! On Tue, May 11, 2010 at 7:50 PM, Christopher Schultz < ch...@christopherschultz.net> wrote: [...] org.python.util.PythonInterpreter.execfile(PythonInterpreter.java:190) factory.JythonFactory.getJythonObject(Jytho

Re: set up tomcat for biopython

2010-05-11 Thread Silvio Tschapke
Ok, I will try this. Thanks a lot for your help! On Tue, May 11, 2010 at 7:50 PM, Christopher Schultz < ch...@christopherschultz.net> wrote: > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA1 > > Silvio, > > On 5/11/2010 1:09 PM, Silvio Tschapke wrote: > > On 5/11/2010 11:36 AM, Silvio Tschapke wr

Re: set up tomcat for biopython

2010-05-11 Thread Christopher Schultz
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Silvio, On 5/11/2010 1:09 PM, Silvio Tschapke wrote: > On 5/11/2010 11:36 AM, Silvio Tschapke wrote: how do I configure tomcat that it finds the biopython libaries? Biopython is not included in jython.jar (which I have moved into the to

Re: set up tomcat for biopython

2010-05-11 Thread André Warnier
Silvio Tschapke wrote: I took a look at jython and actually I am trying to implement a java servlet which calls a python module with help of jython. But I am not sure how and if I can use Biopython inside my jython modules. I do not know anything about jython (or python for that matter), but by

Re: set up tomcat for biopython

2010-05-11 Thread Silvio Tschapke
I took a look at jython and actually I am trying to implement a java servlet which calls a python module with help of jython. But I am not sure how and if I can use Biopython inside my jython modules. On Tue, May 11, 2010 at 6:44 PM, Martin Gainty wrote: > > i would start here > > > > http://sou

Re: set up tomcat for biopython

2010-05-11 Thread Silvio Tschapke
First of all, thanks for your reply! On Tue, May 11, 2010 at 6:33 PM, Christopher Schultz < ch...@christopherschultz.net> wrote: > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA1 > > Silvio, > > I'm not familiar with biopython, so... > > On 5/11/2010 11:36 AM, Silvio Tschapke wrote: > > how do I

RE: set up tomcat for biopython

2010-05-11 Thread Martin Gainty
i would start here http://sourceforge.net/projects/jython/files/ feel free to ask any questions hth Martin Gainty __ Verzicht und Vertraulichkeitanmerkung/Note de déni et de confidentialité Diese Nachricht ist vertraulich. Sollten Sie nic

Re: set up tomcat for biopython

2010-05-11 Thread Christopher Schultz
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Silvio, I'm not familiar with biopython, so... On 5/11/2010 11:36 AM, Silvio Tschapke wrote: > how do I configure tomcat that it finds the biopython libaries? > Biopython is not included in jython.jar (which I have moved into the > tomcat/lib folder.