[Bug 527019] [NEW] em_pscan and em_cons not found for jemboss

Public bug reported: Binary package hint: jemboss Hello, I suspect this is a known issue but: with the Ubuntu emboss packages opting for the new binary names em_pscan and em_cons, the karmic version of Jemboss does not offer these programs. (I haven't looked at any other version of the Jemboss

[Bug 526356] Re: restrict and remap segmentation faults - lucid version on karmic system

Hi Charles, Related to the above: the version numbers for the lucid build of emboss is lower than for the karmic build. I'm not sure how this should be interpreted really. It certainly leads me to have doubts about the versions of libajax6 and libnucleus6 I may have had installed at any given poin

[Bug 526356] Re: restrict and remap segmentation faults - lucid version on karmic system

Hi Charles, Thanks for your swift response to this and to the other issues I reported. I think I had the latest libajax6 and libnucleus6 libraries, but I can't be sure. I'll try to look at this again and let you know. I think the machine I was using is being used for something else at the momen

[Bug 526356] [NEW] restrict and remap segmentation faults - lucid version on karmic system

Public bug reported: Binary package hint: emboss Hello, This may or may not be a "real" bug: I installed the lucid release of emboss (6.1.0-5: amd64) on an karmic (64 bit) system. On testing, some programs (e.g. seqret and emma) worked fine, but restrict and remap crashed out with segmentation

[Bug 526350] [NEW] libfontconfig1 - high version in embassy-phylip

Public bug reported: Binary package hint: embassy-phylip Hello, embassy-phylip is only officially available for lucid. It may be possible to install it on karmic, but the minimum version for libfontconfig, which is a dependency, is above what would be found on karmic systems normally. Is there a

[Bug 526347] [NEW] frestdist documentation should not be in emboss-doc

Public bug reported: Binary package hint: emboss-doc In the karmic release of emboss-doc, the documentation for a phylip program (i.e. an embassy, rather than emboss program) is included in the documentation: /usr/share/EMBOSS/doc/programs/text/frestdist.txt There may be others, I'm not sure.

[Bug 525662] [NEW] Dependency on c shell necessary?

Public bug reported: Binary package hint: emboss The emboss package (all Ubuntu versions available I believe) has csh listed as a dependency. In the changelog notes, it mentions this was added so tests can be run. This is a very minor issue, but it does seem a little extreme to require someone t