Agreed that your original sequences are 1000 char long. But it helps to
understand the problem better if you can give examples with smaller strings.
Please can you post smaller examples? This will also help you test your code
on your own inputs.
On Wed, May 18, 2011 at 5:40 AM, Spyros Charonis wro
"Spyros Charonis" wrote
for item in finalmotifs:
for line in my_list:
if item in line:
print line.index(item)
But this only returns a single number (e.g 119), which is the index
at which
my sequence begins.
Is it possible to get a pair of indices that indicate beginnin
