Re: [Tutor] how to do systematic searching in dictionary and printing it

2005-10-20 Thread Kent Johnson
I would do this by making a dictionary mapping sequence to header for each data set. Then make a set that contains the keys common to both data sets. Finally use the dictionaries again to look up the headers. a = '''>a1 TTAATTGGAACA >a2 AGGACAAGGATA >a3 TTAAGGAACAAA'''.split() # Make a dict map

[Tutor] how to do systematic searching in dictionary and printing it

2005-10-20 Thread Srinivas Iyyer
dear group, I have two files in a text format and look this way: File a1.txt: >a1 TTAATTGGAACA >a2 AGGACAAGGATA >a3 TTAAGGAACAAA File b1.txt: >b1 TTAATTGGAACA >b2 AGGTCAAGGATA >b3 AAGGCCAATTAA I want to check if there are common elements based on ATGC sequences. a1 and b1 are identical se