> So, what if one has to map a string of 15 character nucleotide to a
> jumbo string of characters of length in millions.
Hi Srinivas,
If you're doing research into this, I strongly recommend you take a look
at Dan Gusfield's excellent textbook "Algorithms on Strings, Trees, and
Sequences":
Dear group,
for mapping a string of protein/nucleotides, BLAST is
one tool that is highly sought. However, its
performance is limited due to some factors and one
such factor is length of the query string. IF the
length of the query string is less than 30 characters,
its output is questionable.
