Re: [Tutor] Execution of local data

2015-01-27 Thread Alan Gauld
On 27/01/15 22:47, jarod...@libero.it wrote: I create a list of local object: but I can't execute as object only as string: ena = Rnaseq(options.configura, options.rst) job_1 = ena.trimmomatic() job_2 = ena.star() job_3 = ena.wiggle() job_4 = ena.rnaseqc()

Re: [Tutor] Execution of local data

2015-01-27 Thread Danny Yoo
On Tue, Jan 27, 2015 at 2:47 PM, jarod...@libero.it wrote: > I create a list of local object: but I can't execute as object only as > string: > ena = Rnaseq(options.configura, options.rst) > job_1 = ena.trimmomatic() > job_2 = ena.star() > job_3 = ena.wiggle() >

[Tutor] Execution of local data

2015-01-27 Thread jarod...@libero.it
I create a list of local object: but I can't execute as object only as string: ena = Rnaseq(options.configura, options.rst) job_1 = ena.trimmomatic() job_2 = ena.star() job_3 = ena.wiggle() job_4 = ena.rnaseqc() job_5 = ena.picard_sort_sam()