Re: [Tutor] Biopython

2012-04-10 Thread Alan Gauld
On 10/04/12 21:25, Laura Scearce wrote: Hello, I am using Linux version 2.6 and python version 2.6.6 (gcc version 4.4.5). I have a list of protein names and am trying to get their sequences. OK, That's not unusual and there is a forum somewhere for Python users doing bio type work. However, it

Re: [Tutor] Biopython

2012-04-10 Thread Walter Prins
Hi Laura, On 10 April 2012 22:25, Laura Scearce wrote: > I am using Linux version 2.6 and python version 2.6.6 (gcc version 4.4.5). > What distribution of Linux? (Ubuntu, Debian, Centos or something else?) I followed the instructions and it seemed to work (see below error > messages). > > [s

Re: [Tutor] Biopython

2012-04-10 Thread Emile van Sebille
On 4/10/2012 1:25 PM Laura Scearce said... Hello, I am using Linux version 2.6 and python version 2.6.6 (gcc version 4.4.5). I have a list of protein names and am trying to get their sequences. I thought I would download Biopython, and am having troubles. Your best source for answers pertaining

[Tutor] Biopython

2012-04-10 Thread Laura Scearce
Hello, I am using Linux version 2.6 and python version 2.6.6 (gcc version 4.4.5). I have a list of protein names and am trying to get their sequences. I thought I would download Biopython, and am having troubles. I first downloaded and installed easyinstall from http://pypi.python.org/pypi/setuptoo