[Tutor] FW: extract specific column

2011-10-12 Thread Anna Olofsson
Date: Wed, 12 Oct 2011 14:54:42 -0500 Subject: Re: [Tutor] extract specific column To: olofsson_anna...@hotmail.com CC: tutor@python.org On Wed, Oct 12, 2011 at 12:21 PM, Anna Olofsson wrote: Hi, I'm a beginner at python and I'm trying to extract a specific column fr

[Tutor] extract specific column

2011-10-12 Thread Anna Olofsson
t 12, 2011 at 12:21 PM, Anna Olofsson wrote: Hi, I'm a beginner at python and I'm trying to extract a specific column from a txt file ( see attached file). In the attached file I want to extract the entire column pph2_

[Tutor] extract specific column

2011-10-12 Thread Anna Olofsson
Hi, I'm a beginner at python and I'm trying to extract a specific column from a txt file ( see attached file). In the attached file I want to extract the entire column pph2_prob (i.e. column 16). But I want to get all the values from tha

[Tutor] extract specific column

2011-10-12 Thread Anna Olofsson
Hi, I'm a beginner at python and I'm trying to extract a specific column from a txt file ( see attached file). In the attached file I want to extract the entire column pph2_prob (i.e. column 16). But I want to get all the values from that

Re: [Tutor] vcf_files and strings

2011-10-09 Thread Anna Olofsson
;:print col[withRefSeqID] hth From: Anna Olofsson To: tutor@python.org Sent: Friday, October 7, 2011 12:12 PM Subject: [Tutor] vcf_files and strings Hi, I'm a beginner at Python and would really appreciate some help in how to extract information from a vcf file. The attached file

[Tutor] vcf_files and strings

2011-10-07 Thread Anna Olofsson
Hi, I'm a beginner at Python and would really appreciate some help in how to extract information from a vcf file. The attached file consists of a lot of information on mutations, this one though is just 2 rows and 10 columns (the real one has a lot more rows). I want to extract the mRNA ID

[Tutor] vcf_files and strings

2011-10-05 Thread Anna Olofsson
Hi, I'm a beginner at Python and would really like some help in how to extract information from a vcf file. The attached file consists of a lot of information on mutations, this one though is just 2 rows and 10 columns (the real one has a lot more rows). I want to extract the mRNA ID only i

[Tutor] extract information from txtfile

2011-10-04 Thread Anna Olofsson
Hi, I'm a beginner at Python and I'm trying to extract some information from a textfile where I have a lot of data. The table looks something like this, but with many more columns and rows: # chr Pos ID REFALT . . . . . . . . . . . 1 13645 -

[Tutor] Tables

2011-10-03 Thread Anna Olofsson
Hi, I'm a beginner at Python and I have tried to read the Python manual, but I still can't figure out how to extract columns from a table and then create a new table by merge these extracted tables together. Best, Anna ___ Tutor maillist - Tutor@pyth