[slurm-users] slurm SBATCH - Multiple Nodes, Same SLURMD_NODENAME

StackOverflow Thread: https://stackoverflow.com/questions/51328917/slurm-sbatch-multiple-nodes-same-slurmd-nodename possibly related to: https://groups.google.com/forum/#!topic/slurm-users/suclnO2V0aA - slurm-wlm 17.11.2 - Installed from Ubuntu Apt repos, Ubuntu:18.04 We have a cluster of 20 i

[slurm-users] Limit shared memory usage

files in the given job's memory consumption, k?illing said job if its application memory + shared memory use exceeds the allocated value. Can anyone advise how I would go about doing this? Many thanks, Sam ________ Sam Hawarden Assistant Research Fellow Patho

Re: [slurm-users] Accounting: set default account with no access

imits) So the lua script is preferable. Kind regards, Sam ? From: slurm-users on behalf of Yair Yarom Sent: Wednesday, 7 November 2018 00:58 To: Slurm User Community List Subject: Re: [slurm-users] Accounting: set default account with no access Hi, You c

Re: [slurm-users] CPU & memory usage summary for a job

those data points over time, then shove them through an R script to plot the usage: https://github.com/shawarden/simple-web? Cheers, Sam ________ Sam Hawarden Assistant Research Fellow Pathology Department Dunedin School of Medicine From: s

Re: [slurm-users] requesting resources and afterwards launch an array of calculations

'{ someCommand -args -and -options {} }' ) Where {} is $thing In operation here?<https://github.com/shawarden/Fastq2VCF/blob/master/slurm-scripts/blockalign.sl#L215> Cheers, Sam ____ Sam Hawarden Assistant Research Fellow Pathology Department Dunedin Sc

Re: [slurm-users] Accounting: Default Associations for Unknown Accounts

one. sacctmgr add user $user DefaultAccount=nullAccount fi done There's also a relatively simple inverse script to remove users who are no longer in the group. Regards, Sam Sam Hawarden Assistant Research Fellow Pathology Department Dunedin

Re: [slurm-users] [Slurm 18.08.4] sacct/seff Inaccurate usercpu on Job Arrays

ng a debug partition with restricted walltimes? Regards, Sam ________ Sam Hawarden Assistant Research Fellow Pathology Department Dunedin School of Medicine sam.hawarden(at)otago.ac.nz From: slurm-users on behalf of Chance Bryce Carl Ne

Re: [slurm-users] Only one socket for SLURM

via taskset. Kind regards, Sam ________ Sam Hawarden Assistant Research Fellow Pathology Department Dunedin School of Medicine From: slurm-users on behalf of Gestió Servidors Sent: Tuesday, 19 February 2019 03:52 To: slurm-users@lists.

Re: [slurm-users] Getting current memory size of a job

we have yet to implement. Kind regards, Sam Hawarden Assistant Research Fellow Pathology Department Dunedin School of Medicine From: slurm-users on behalf of Mahmood Naderan Sent: Saturday, 30 March 2019 04:01 To: Slurm User Community List Subj

[slurm-users] Node Specific Core Distribution

Hi All, I'm hoping that someone many have encountered this scenario and knows of a solution. Basically we wish to change the default core distribution but only for specific compute nodes. The current default distribution is cyclic, but for specific nodes we would like to override this behaviour

[slurm-users] Removing WCKey

Hi, I'm having problems trying to remove a wckey associated with a user account. According to the documentation it should be simply a case of 'sacctmgr del user wckey=' but when I try it doesn't seem to like it. An example for a user called user1 ... # sacctmgr add user user1 wckey=test1 WCKe

Re: [slurm-users] ConstrainRAMSpace=yes and page cache?

may consider using either vmtouch (https://hoytech.com/vmtouch/) and or linux-ftools (https://code.google.com/archive/p/linux-ftools/). Both use the mincore/fadvise to query, allocate, evict page cache for specific files or directories. --- Sam Gallop -Original Message- From: slurm-us

Re: [slurm-users] Rename account or move user from one account to another

supports a value of 0. While not exactly what you want you could add the user to the new account, change the defaultaccount and then remove the user from the old account. However it doesn't retain the user's historical usage which I guess is ultimately what you want. --- Sam Gallop -

Re: [slurm-users] status of cloud nodes

Hi Nathan, The command I use to get the reason for failed nodes is ... 'sinfo -Ral'. If you need to extend the width of the output then ... 'sinfo -Ral -O reason:35,user,timestamp,statelong,nodelist'. Using the timestamp of the failure look in the slurmd or slurmctld l

Re: [slurm-users] How can jobs request a minimum available (free) TmpFS disk space?

Just to add the conversation. We also wrote our own GRES/plugin for this. Similarly the GRES enables the user to select the amount of GB units that they require. The plugin part invokes LVM to create a logical volume on an SSD device for the requested size. The volume is then made available to t

Re: [slurm-users] Distribute a single node resources across multiple partitons

node and use the '-N' option to run the daemon with the given hostname, for example 'slurmd -N tux01'. Like I say, it's a bit of a kludge. thanks, Sam From: slurm-users On Behalf Of Purvesh Parmar Sent: Thursday, July 6, 2023 1:21 PM To: Slurm User Community List Subjec

Re: [slurm-users] giving smaller jobs higher priority

Hi Satra, Have a look at PriorityFavorSmall (in slurm.conf). It may fit your needs. Not used it myself, so I'm not able to say if it'll do exactly what you're after. --- Samuel Gallop From: slurm-users [mailto:slurm-users-boun...@lists.schedmd.com] On Behalf Of Satrajit Ghosh Sent: 22 Novembe