Re: [slurm-users] Slurm missing non primary group memberships

2018-11-20 Thread Chris Samuel
On Tuesday, 20 November 2018 10:12:59 PM AEDT Janne Blomqvist wrote: > I reworked the logic so that it should only be required in some special > weird cases. But that patch was several years ago, hopefully whatever > bugs were caused by it have been ironed out by now (*knocking on wood*). It's wo

Re: [slurm-users] Slurm missing non primary group memberships

2018-11-20 Thread Janne Blomqvist
On 10/11/2018 13.17, Douglas Jacobsen wrote: We've had issues getting sssd to work reliably on compute nodes (at least at scale), the reason is not fully understood, but basically if the connection times out with sssd it'll black list the server for 60s, which then causes those kinds of issues.

Re: [slurm-users] Slurm missing non primary group memberships

2018-11-14 Thread Aravindh Sampathkumar
Sorry for the late response. The erratic behaviour of group affiliations seemed inconsistent. Some of the nodes experienced such oddity while other nodes were able to display the group memberships properly. I tried setting LaunchParameters=send_gids as per Douglas Jacobsen's suggestion by doing1.

Re: [slurm-users] Slurm missing non primary group memberships

2018-11-13 Thread Antony Cleave
Are you sure this isn't working as designed? I remember there is something annoying about groups in the manual. Here it is. This is why I prefer accounts. *NOTE:* For performance reasons, Slurm maintains a list of user IDs allowed to use each partition and this is checked at job submission time.

Re: [slurm-users] Slurm missing non primary group memberships

2018-11-13 Thread Joerg Sassmannshausen
Dear all, I am wondering if that is the same issue we are having here as well. When I am adding users in the secondary group some time *after* the initial user installation, the user cannot access the slurm partition it suppose to. We found two remedies here, more or less by chance: - rebooting bo

Re: [slurm-users] Slurm missing non primary group memberships

2018-11-10 Thread Douglas Jacobsen
We've had issues getting sssd to work reliably on compute nodes (at least at scale), the reason is not fully understood, but basically if the connection times out with sssd it'll black list the server for 60s, which then causes those kinds of issues. Setting LaunchParameters=send_gids will sideste

Re: [slurm-users] Slurm missing non primary group memberships

2018-11-09 Thread Chris Samuel
On Friday, 9 November 2018 2:47:51 AM AEDT Aravindh Sampathkumar wrote: > navtp@console2:~> ssh c07b07 id > uid=29865(navtp) gid=510(finland) groups=510(finland),508(nav),5001(ghpc) > context=unconfined_u:unconfined_r:unconfined_t:s0-s0:c0.c1023 Do you have SElinux configured by some chance? If

Re: [slurm-users] Slurm missing non primary group memberships

2018-11-09 Thread Joerg Sassmannshausen
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[slurm-users] Slurm missing non primary group memberships

2018-11-08 Thread Aravindh Sampathkumar
Hello all. I'm seeing something strange related to group memberships and how it bothers Slurm. Appreciate any ideas to understand what is going on. It appears that only the primary group of the user is propagated when Slurm runs a job. The additional group memberships vanish. This is not expected