Re: [slurm-users] Question about networks and connectivity

2019-12-09 Thread Jeffrey T Frey
Open MPI matches available hardware in node(s) against its compiled-in capabilities. Those capabilities are expressed as modular shared libraries (see e.g. $PREFIX/lib64/openmpi). You can use environment variables or command-line flags to influence which modules get used for specific purposed.

Re: [slurm-users] Question about networks and connectivity

2019-12-09 Thread Sysadmin CAOS
Hi mercan, OK, I forgot to compile OpenMPI with Infiniband support... But I still have a doubt: SLURM scheduler assigns (offers) some nodes called "node0x" to my sbatch job because in my SLURM cluster nodes have been added with "node0x" name. My OpenMPI application has been (now) compiled wit

Re: [slurm-users] Question about networks and connectivity

2019-12-05 Thread mercan
Hi; Your mpi and NAMD use your second network because of your applications did not compiled for infiniband. There are many compiled NAMD versions. the verb and ibverb versions are for using infiniband. Also, when you compiling the mpi source, you should check configure script detect the infin

[slurm-users] Question about networks and connectivity

2019-12-05 Thread sysadmin.caos
Hello, Really, I don't know if my question is for this mailing list... but I will explain my problem and, then, you could answer me whatever you think ;) I manage a SLURM clusters composed by 3 networks: a gigabit network used for NFS shares (192.168.11.