Dear Merlin,
Thank you for your comments. Following your suggestion, I set memory for each
CPU. Actually, it does not work.
JobIDJobName PartitionAccount AllocCPUS State ExitCode
-- -- -- -- --
1463 96
Dear David,
Thank you for your reply. I did it. It did request one CPU.
I added your command into my job file
#!/bin/sh
#SBATCH --partition=defq
#SBATCH --ntasks-per-node=2
#SBATCH -n 1
#SBATCH --mem-per-cpu=5gb
#SBATCH --ntasks=1
#SBATCH --cpus-per-task=1
#SBATCH -t 45-00:00:00
#SBATCH -J 9673%j
On Monday, 18 February 2019 6:04:26 AM PST נדב טולדו wrote:
> I am trying to give users ssh access via pam_slurm_adopt.
> I've installed the module and it worked correctly on testing environment
> But when i add pbis-open modules (which auth users against active
> directory), users are able to ssh
On Monday, 18 February 2019 2:15:35 PM PST Jing Gong wrote:
> I am just wondering if there are any srun flags to
> allocate the last MPI-rank to an exclusive node
Have a look at Slurm's heterogenous job support.
There are restrictions around the MPI 's that support it though, I think you
might
Hi,
I am just wondering if there are any srun flags to
allocate the last MPI-rank to an exclusive node, for example,
#SBATCH -N 3 # 3 nodes
#SBATCH --tasks-per-node=10
#SBATCH --cpu-per-task=1 # 10 MPI-rank per node
srun -n 21 ... ./application# MPI-rank 0-9 on node 0; MPI-rank
Hi,
One node of my cluster has 2 CPU sockets (with 2 32-cores CPUs). Now, I would
like to configure my SLURM to share only CPUs of first socket. I have
configured slurm.conf in this way:
NodeName=mynode CPUs=32 SocketsPerBoard=1 CoresPerSocket=16 ThreadsPerCore=2
RealMemory=515703 TmpDisk=27000
It works, thank you.
Best,
M
> On Feb 18, 2019, at 3:03 PM, Renfro, Michael wrote:
>
> If you’re literally putting spaces around the ‘=‘ character, I don’t think
> that’s valid shell syntax, and should throw errors into your slurm-JOBID.out
> file when you try it.
>
> See if it works with A=
May be some aspects outside of slurms control that are tied to the
machine you are using which require a specific way of handling
environment variables. You might try the following:
#!/bin/bash
#SBATCH --job-name=my_job
#SBATCH —time=01:00:00
for A in 1 2
do
time ./my_code.o -a ${A}
done
On
Dear Michele,
Castellana Michele writes:
> Dear all,
> I would like to use a variable within a slurm script as shown in the
> following minimal working example. I want to define a variable A,
> assign a value to it, and run multiple times a code where I use A in a
> command-line flag:
>
> #!/b
Hello everyone,
I am trying to give users ssh access via pam_slurm_adopt.
I've installed the module and it worked correctly on testing
environment
But when i add pbis-open modules (which auth users against active
directory),
users are able to s
If you’re literally putting spaces around the ‘=‘ character, I don’t think
that’s valid shell syntax, and should throw errors into your slurm-JOBID.out
file when you try it.
See if it works with A=1.0 instead of A = 1.0
> On Feb 18, 2019, at 7:55 AM, Castellana Michele
> wrote:
>
> External
Dear all,
I would like to use a variable within a slurm script as shown in the following
minimal working example. I want to define a variable A, assign a value to it,
and run multiple times a code where I use A in a command-line flag:
#!/bin/sh
#SBATCH --job-name=my_job
#SBATCH —time=01:00:00
A
Hi Marcus,
sure, using Prioritytier is fine. And my point wasn't so much about
preepmtion but exactely about to use just one partition and no
preemption instead of two partitions, which is what David was asking
for, isn't? But actuallym, I forgot that you can do it in one partition
too by using pr
Hi Andreas,
doesn't it suffice to use priority tier partitions? You don't need to
use preemption at all, do you?
Best
Marcus
On 2/18/19 8:27 AM, Henkel, Andreas wrote:
Hi David,
I think there is another option if you don’t want to use preemption.
If the max runlimit is small (several hou
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