Re: [R-pkg-devel] WInbuilder and rHub updating

2019-05-21 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
lable for incoming checks, > perhaps with some short technical delays of less than one hour. > > > For winbuilder on demand checks, there may be a lag of 2 days. Requests may > be considered. > > Best, > Uwe Ligges > > > On 19.05.2019 20:09, Roy Mendelssohn -

Re: [R-pkg-devel] Cran check on Solaris

2019-05-28 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
> On May 28, 2019, at 11:50 AM, Iñaki Ucar wrote: > > On Tue, 28 May 2019 at 20:12, Τόλης Χαλκής wrote: >> >> Dear all, >> >> we have submitted the package volesti to CRAN and it is temporarily >> accepted, because the check in solaris and >> window

[R-pkg-devel] Note on winbuilder-develop

2019-07-23 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
80 e-mail: roy.mendelss...@noaa.gov www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] Note on winbuilder-develop

2019-07-23 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
Thanks, I was looking at the raw files, not the .Rd files. There are \keyword arguments in those file, will have to search to see why they are getting generated. -Roy > On Jul 23, 2019, at 6:02 PM, Duncan Murdoch wrote: > > On 23/07/2019 8:26 p.m., Roy Mendelssohn - NOAA Fede

[R-pkg-devel] Needing rgeos from sf

2019-07-25 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
v www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __

Re: [R-pkg-devel] Needing rgeos from sf

2019-07-25 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
on 'rhub' using Windows.So it appears to be a problem with Windows, and again I am not calling these packages directly so I should not need to Import them. Thanks, -Roy > On Jul 25, 2019, at 12:38 PM, Duncan Murdoch wrote: > > On 25/07/2019 3:21 p.m., Roy Mendelssohn - NO

Re: [R-pkg-devel] Needing rgeos from sf

2019-07-25 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
this as well, by > figuring out what part of using_plotdap.Rmd needs rgdal, and wrapping that > code in something like > > if (requireNamespace("rgdal")) { > # code that needs it > } > > I think this will mean you need to add rgdal to the Suggests list for your

[R-pkg-devel] Finding UTF character in .RData file

2019-08-05 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
they were text files I could readily scan for UTF, is there a way once I read the data into R to do a similar scan from within R. I just ran the most recent (Github) version of devtools::check() and it doesn't report an error. Or is there a way I can get more specific information from the

Re: [R-pkg-devel] Finding UTF character in .RData file

2019-08-05 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
but still persists - like rgdal, rerddap, crul, ncdf4). -Roy - > On Aug 5, 2019, at 8:50 AM, Duncan Murdoch wrote: > > On 05/08/2019 10:51 a.m., Roy Mendelssohn - NOAA Federal via R-package-devel > wrote: >> Hi All: >> The recent nighty CRAN checks on one of my packag

Re: [R-pkg-devel] Finding UTF character in .RData file

2019-08-05 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
build a number > of required packages, something I have reported but still persists - like > rgdal, rerddap, crul, ncdf4). > > -Roy > - >> On Aug 5, 2019, at 8:50 AM, Duncan Murdoch wrote: >> >> On 05/08/2019 10:51 a.m., Roy Mendelssohn - NOAA Federal via R-packag

Re: [R-pkg-devel] Finding UTF character in .RData file

2019-08-05 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
rddap, crul, ncdf4). >> >> -Roy >> - >>> On Aug 5, 2019, at 8:50 AM, Duncan Murdoch wrote: >>> >>> On 05/08/2019 10:51 a.m., Roy Mendelssohn - NOAA Federal via >>> R-package-devel wrote: >>>> Hi All: >>>> The recent ni

[R-pkg-devel] Resubmitting after a few days

2019-09-24 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
www: https://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __________ R-

Re: [R-pkg-devel] Resubmitting after a few days

2019-09-25 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
Thanks all. I asked because I don't want to unnecessarily overburden the CRAN maintainers. In this case, it wasn't a minor bug. -Roy > On Sep 25, 2019, at 4:36 AM, Dirk Eddelbuettel wrote: > > > On 24 September 2019 at 11:43, Roy Mendelssohn - NOAA Federal via &

Re: [R-pkg-devel] checking CRAN incoming feasibility NOTE

2019-10-05 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
://cransays.itsalocke.com/articles/dashboard.html HTH, -Roy > On Oct 5, 2019, at 2:52 PM, R. Mark Sharp wrote: > > I getting ready to submit a package to CRAN for the first time. I have run > cran_prep <- check_for_cran() using the rhub package. I understand that as a > n

Re: [R-pkg-devel] Tarball can't be unpacked

2019-10-14 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
t; Uwe Ligges > > On 13.10.2019 07:00, Dalgleish, James (NIH/NCI) [V] via R-package-devel wrote: >> * using log directory 'd:/RCompile/CRANincoming/R-devel/CNVScope.Rcheck' >> * using R Under development (unstable) (2019-10-10 r77275) >> * using platform: x86_64-w

Re: [R-pkg-devel] Tarball can't be unpacked

2019-10-14 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
I have tried the upload page several times. it gives the following error ERROR: Access to the path 'C:\Inetpub\ftproot\R-release\plotdap_0.0.4.tar.gz' is denied. Same for R-devel. Permission problems? Thanks, -Roy > On Oct 14, 2019, at 11:41 AM, Duncan Murdoch wrote: > &g

Re: [R-pkg-devel] Tarball can't be unpacked

2019-10-14 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
e: > > > > On 14.10.2019 20:43, Roy Mendelssohn - NOAA Federal wrote: >> I have tried the upload page several times. it gives the following error >> ERROR: Access to the path >> 'C:\Inetpub\ftproot\R-release\plotdap_0.0.4.tar.gz' is denied. > > A

[R-pkg-devel] netcdf question

2019-11-04 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] CRAN rules re. web scraping?

2020-01-22 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
olicy is to write to a temp directory, R has tempdir() and related commands for how to do this. 2. When accessing something over the internet, failure of the access must be checked for and the program exiting gracefully. The second error appears to be that at times on the builds the .csv fi

Re: [R-pkg-devel] new package processing time

2020-02-03 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
> [[alternative HTML version deleted]] > > __ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel ** "The contents of this message do not reflect any position of the U.S. Government or NOAA." *

[R-pkg-devel] Suggests in a Package

2020-02-04 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
oaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] Suggests in a Package

2020-02-04 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
Thanks. And thanks for the tip. -Roy > On Feb 4, 2020, at 10:20 AM, Duncan Murdoch wrote: > > On 04/02/2020 1:13 p.m., Roy Mendelssohn - NOAA Federal via R-package-devel > wrote: >> Hi All: >> I still get a little confused on what it means if a package is liste

Re: [R-pkg-devel] Winbuilder queues jammed again?

2020-03-05 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
'll try to investigate. Thanks for the suggestion. > > cheers, > > Rolf > > > -- > Honorary Research Fellow > Department of Statistics > University of Auckland > Phone: +64-9-373-7599 ext. 88276 > > __ >

[R-pkg-devel] Warnings from gdal

2020-07-26 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
t;the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] Warnings from gdal

2020-07-27 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
> 1610 Reynolds Street > Laramie, WY 82072 > 307-760-4721 > www.west-inc.com > > Trent McDonald > Principal Statistician > > Western EcoSystems Technology, Inc. > Environmental & Statistical Consultants > 1610 Reynolds Street > Laramie, WY 82072 > 307-76

[R-pkg-devel] URL Note

2020-10-22 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr. ______ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] URL Note

2020-10-22 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
Thanks. I had checked for that but at first didn't find the one instance where this occurred. Got it. -Roy > On Oct 22, 2020, at 2:18 PM, Uwe Ligges > wrote: > > > > On 22.10.2020 23:15, Roy Mendelssohn - NOAA Federal via R-package-devel wrote: >> Hi All: &

[R-pkg-devel] Pre-test failure

2020-10-23 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
ot;the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] Pre-test failure

2020-10-23 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
IW I always *think* I'm testing very carefully, and I almost always get > something wrong ...) > > On 10/23/20 11:18 AM, Roy Mendelssohn - NOAA Federal via R-package-devel > wrote: >> I test my packages very carefully before submission. Earlier today I >>

[R-pkg-devel] pretest order

2020-10-23 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
d skill." "From those who have been given much, much will be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] pretest order

2020-10-23 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
t; stuck in the queue, will clear that up shortly. > > > Best, > Uwe > > On 23.10.2020 19:17, Roy Mendelssohn - NOAA Federal via R-package-devel wrote: >> Just out of curiousity, how is pretest order determined? I have a package >> that was submitted yesterda

[R-pkg-devel] Number of days since last submission

2020-10-28 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
treachery will overcome youth and skill." "From those who have been given much, much will be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr. __________ R-package-devel@r-project.org mailing list

Re: [R-pkg-devel] help interpreting a response from CRAN

2020-11-22 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
; | An alternative is that this is a confusingly worded message indicating >>> that there are strong rev dependencies so the package needs to be further >>> checked? (That seems unlikely as it explicitly asks me to resubmit) >>> >>> No. If there were any (even false positive ones) they'd b

Re: [R-pkg-devel] Note: checking CRAN incoming feasibility but the package did not pass

2021-02-13 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
submit a fixed version via the webform. > > > Please, could you help me to solve this issue? > > > Best, > > *-* > > *Aristide Elysée HOUNDETOUNGAN* > *Ph.D. Candidate in Economics at Université Laval* > *Personal website : *www.ahoundetoungan.com > >

[R-pkg-devel] r-hub question

2024-12-18 Thread Roy Mendelssohn - NOAA Federal via R-package-devel
Hi All: r-hub has changed the way that it works. Now you need Github, plus it writes things to your Github repo. I do not understand what it writes, I am always loath to add anything to a repo I don't understand, and I wonder if it conflicts in any way with existing Github actions

[R-pkg-devel] Old version of rtracklayer on a single check server

2021-05-18 Thread Dalgleish, James (NIH/NCI) [F] via R-package-devel
e 'CNVScope' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Warning: multiple methods tables found for 'export' Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionChec

Re: [R-pkg-devel] Old version of rtracklayer on a single check server

2021-05-19 Thread Dalgleish, James (NIH/NCI) [F] via R-package-devel
Thanks to Martin and Henrik for an in-depth discussion that really helped me quite a bit. Requiring R-4.1.0 made it CRAN compliant and stopped the installation issues on both check servers. Considering the number of packages that use rtracklayer (it’s one of the most used packages on

[R-pkg-devel] Fixing package issues on a previous version of your package

2022-03-29 Thread Dalgleish, James (NIH/NCI) [F] via R-package-devel
5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : there is no package called 'Hmisc' Calls: ... load

[R-pkg-devel] Tarball can't be unpacked

2019-10-14 Thread Dalgleish, James (NIH/NCI) [V] via R-package-devel
* using log directory 'd:/RCompile/CRANincoming/R-devel/CNVScope.Rcheck' * using R Under development (unstable) (2019-10-10 r77275) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking whether tarball can be unpacked ... ERROR cannot unpack '

[R-pkg-devel] Solaris package installed size

2019-10-15 Thread Dalgleish, James (NIH/NCI) [V] via R-package-devel
On Solaris, I'm finding that my package, only on Solaris, is slightly above 5MB. Is there a difference in install sizes for Solaris? I don't have a Solaris machine, so it's difficult to know what the size differences are and why. https://www.r-project.org/nosvn/R.check/r-patc

[R-pkg-devel] Issue with Biostrings-- can't find the base rgb function on r-devel

2019-12-04 Thread Dalgleish, James (NIH/NCI) [V] via R-package-devel
ck Details Version: 1.0.2 Check: whether the package can be unloaded cleanly Result: WARN Error: package or namespace load failed for 'NIPTeR': .onLoad failed in loadNamespace() for 'Biostrings', details: call: rgb(1, 1, 1) error: could not find function "

[R-pkg-devel] checking package dependencies ... ERROR

2020-06-25 Thread Guo, Wei (NIH/NIMH) [C] via R-package-devel
* using log directory 'd:/RCompile/CRANincoming/R-devel/postGGIR.Rcheck' * using R Under development (unstable) (2020-06-23 r78741) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'postGGIR/DESCRIPTION' ... OK * che

[R-pkg-devel] error when submit a package

2020-06-26 Thread Guo, Wei (NIH/NIMH) [C] via R-package-devel
[[alternative HTML version deleted]] ______ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] error when submit a package

2020-06-26 Thread Guo, Wei (NIH/NIMH) [C] via R-package-devel
Sent: Friday, June 26, 2020 5:23 PM To: Zehao Xu Cc: Bert Gunter ; Guo, Wei (NIH/NIMH) [C] ; r-package-devel@r-project.org Subject: Re: [R-pkg-devel] error when submit a package On 26 June 2020 at 19:16, Zehao Xu wrote: | Package suggested but not available for checking: 'actig

[R-pkg-devel] Static vignettes / bibtex warning in Debian

2020-10-10 Thread Candia, Julian (NIH/NCI) [E] via R-package-devel
Hello, I’m trying to include a static vignette by embedding a pdf document in latex. The procedure is very simple and is discussed here: http://www.markvanderloo.eu/yaRb/2019/01/11/add-a-static-pdf-vignette-to-an-r-package It essentially boils down to creating a .Rnw file with the following

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