Re: [R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-27 Thread Ralf Stubner
On Thu, Sep 26, 2019 at 3:41 PM Sameh M. Abdulah wrote: > > I am installing my dependencies including OpenBLAS during the package > installation via the configure file. > What is surprising me that even all dependencies are installed successfully. > R cannot load one of the library > that depen

Re: [R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-26 Thread Sameh M. Abdulah
I am installing my dependencies including OpenBLAS during the package installation via the configure file. What is surprising me that even all dependencies are installed successfully. R cannot load one of the library that depends on LAPACKE. My method is to install all my dependencies inside th

Re: [R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-26 Thread Ralf Stubner
On Wed, Sep 25, 2019 at 3:34 PM Sameh M. Abdulah wrote: > My package depends on another C-based software that needs LAPACKE to compile. > I do not know a lot about it. I think adding LAPACKE to my package will be a > good solution. > Could you please give me more information of how to do this?

Re: [R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-25 Thread Sameh M. Abdulah
Dear Ralf My package depends on another C-based software that needs LAPACKE to compile. I do not know a lot about it. I think adding LAPACKE to my package will be a good solution. Could you please give me more information of how to do this? --Sameh On 9/25/19, 2:00 PM, "Ralf Stubner" wro

Re: [R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-25 Thread Tomas Kalibera
On 9/25/19 1:00 PM, Ralf Stubner wrote: On Wed, Sep 25, 2019 at 10:29 AM Sameh M. Abdulah wrote: I am installing OpenBLAS because I need LAPACKE libraries which I cannot find on the current version of OpenBLAS on CRAN. I add the libraries directory in my package to the PKG_CONFIG_PATH. Is thi

Re: [R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-25 Thread Ralf Stubner
On Wed, Sep 25, 2019 at 10:29 AM Sameh M. Abdulah wrote: > I am installing OpenBLAS because I need LAPACKE libraries which I cannot find > on the current version of OpenBLAS on CRAN. > > I add the libraries directory in my package to the PKG_CONFIG_PATH. Is this > enough for the system to use my

Re: [R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-25 Thread Sameh M. Abdulah
Thanks Ralf I am installing OpenBLAS because I need LAPACKE libraries which I cannot find on the current version of OpenBLAS on CRAN. I add the libraries directory in my package to the PKG_CONFIG_PATH. Is this enough for the system to use my OpenBLAS library? Thanks Sameh On 9/25/19, 10:23

Re: [R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-25 Thread Ralf Stubner
On Tue, Sep 24, 2019 at 12:10 PM Sameh M. Abdulah wrote: > I am uploading my R package to CRAN. One of the dynamic libraries the package > requires depends on LAPACKE library which usually integrated with BLAS and > CBLAS in the same .so file (as I understand). CRAN has OpenBLAS already > insta

[R-pkg-devel] Package or namespace load failed: undefined symbol

2019-09-24 Thread Sameh M. Abdulah
Hi, I am uploading my R package to CRAN. One of the dynamic libraries the package requires depends on LAPACKE library which usually integrated with BLAS and CBLAS in the same .so file (as I understand). CRAN has OpenBLAS already installed on the system. However, this OpenBLAS library does not m