Re: [R-pkg-devel] CRAN uses an old version of clang

All this makes sense, thanks for your tips, everyone! Marcin On Fri, Feb 9, 2024 at 9:44 AM Dirk Eddelbuettel wrote: > > On 9 February 2024 at 08:59, Marcin Jurek wrote: > | I recently submitted an update to my package. It previous version relied > on > | Boost for Bessel and

[R-pkg-devel] CRAN uses an old version of clang

Dear community, I recently submitted an update to my package. It previous version relied on Boost for Bessel and gamma functions but a colleague pointed out to me that they are included in the standard library beginning with the C++17 standard. I don't have access to a Mac so I tested my package

Re: [R-pkg-devel] failing CRAN checks due to problems with dependencies

Ok, this makes sense! I saw that Rcpp was failing the checks too but I wasn't sure if I should resubmit or wait. Thanks! On Thu, Feb 8, 2024 at 1:17 PM Ivan Krylov wrote: > В Wed, 7 Feb 2024 08:40:44 -0600 > Marcin Jurek пишет: > > > Packages required but not ava

[R-pkg-devel] failing CRAN checks due to problems with dependencies

Dear community, I've been trying to submit an update to my GPvecchia package recently. This morning I was notified that my package didn't pass incoming checks. When I looked at the log this was the problem: * checking package dependencies ... ERROR Packages required but not available: 'sparseinv'

Re: [R-pkg-devel] Note: information on .o files is not available / Found '_exit', possibly from '_exit' (C)

So maybe you tried that already but I noticed that sometimes when I do the check on the package directory rather than on the tarball I get similar errors. I don't know if that's the problem but it should be a quick thing to try. On Fri, Jul 17, 2020 at 5:05 AM Fabio Sigrist wrote: > Dear all, >

[R-pkg-devel] debugging memory sanitation errors

submission GPvecchia 0.1.3 To: Marcin Jurek , CRAN < cran-submissi...@r-project.org> Thanks, we see: checking with clang-UBSAN still has /data/gannet/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/subview_meat.hpp:1277:23: runtime error: reference binding to null pointer of type

Re: [R-pkg-devel] potential memory leak using openMP

Thanks for the suggestion! I tried but to the same effect: no errors. On Fri, Nov 15, 2019 at 12:01 PM Ivan Krylov wrote: > On Fri, 15 Nov 2019 10:49:25 -0600 > Marcin Jurek wrote: > > > 1) what should I do to reproduce the error? > > The following is a quick, unchecked su

[R-pkg-devel] potential memory leak using openMP

Hello everyone, so my package was rejected from CRAN because of the following error: ==29416== 640 bytes in 2 blocks are possibly lost in loss record 162 of 2,089 ==29416==at 0x4837B65: calloc (coregrind/m_replacemalloc/vg_replace_malloc.c:762) ==29416==by 0x40118B1: allocate_dtv (/build/g

[R-pkg-devel] debugging memory errors

Hello, I'm trying to submit my package to CRAN and received the following error message: Error(s) in re-building vignettes: --- re-building ‘GPvecchia_vignette.Rmd’ using rmarkdown .../RcppArmadillo/include/armadillo_bits/subview_meat.hpp:1223:54: runtime error: reference binding to null pointer o

[R-pkg-devel] please help understand an error in openMP statements

Hello everyone, I'm submitting a package to CRAN which I tested locally, on Travis CI, R-hub and win builder. It worked no problem in all these environments. However, after submission, I keep getting the error described here: