Re: [R-pkg-devel] Changes in function call with respect to the current published version

Hi Georgi, Uri, John and List, Thank you, that was very helpful! Kind regards Jose Barrera Statistician, Associate Lecturer *IS**Global* Barcelona Institute for Global Health - Campus MAR Barcelona Biomedical Research Park (PRBB) (Room Hypatia) Doctor Aiguader, 88 08003 Barcelona, Spain Tel

[R-pkg-devel] Changes in function call with respect to the current published version

y the disadvantage I mentioned just above. I would appreciate advice on: 1) There could be other disadvantages for users of previous versions that I don't see? 2) What would be the best location(s) in the documentation to explain in detail this change? Thanks in advance, Jose Barrera St

Re: [R-pkg-devel] README.html doesn't show figures in CRAN web

Dear Duncan, Indeed, I had accidentally deleted man/figures before tar.gz. Silly error. Now fixed and working. Thanks for the light. Jose Barrera Statistician, Associate Lecturer ISGlobal Barcelona Institute for Global Health - Campus MAR Barcelona Biomedical Research Park (PRBB) (Room Hypatia

[R-pkg-devel] README.html doesn't show figures in CRAN web

;, section 20.5.2, I can see, they set knitr::opts_chunk$set(fig.path = "README-) Should I set fig.path = "README-" instead of fig.path = "man/figures/README-" even if my html is not for GitHub? Where should I place the png figure files created by the Rmd? Any thoughts wou

Re: [R-pkg-devel] Why .Rbuildignore doesn't ignore?

Dear Jeff, I am aware I don't need to be worried about those two warnings but many thanks anyway. Jose Barrera Statistician, Associate Lecturer *IS**Global* Barcelona Institute for Global Health - Campus MAR Barcelona Biomedical Research Park (PRBB) (Room Hypatia) Doctor Aiguader, 88

Re: [R-pkg-devel] Why .Rbuildignore doesn't ignore?

uildignore(list.files(), "." points to the files I want to be ignored. Many thanks, Jose Barrera Statistician, Associate Lecturer *IS**Global* Barcelona Institute for Global Health - Campus MAR Barcelona Biomedical Research Park (PRBB) (Room Hypatia) Doctor Aiguader, 88 08003 Barcelon

Re: [R-pkg-devel] Why .Rbuildignore doesn't ignore?

7;nobody' Then $ R CMD check --as-cran miclust_1.2.6.tar.gz If I move miclust.Rproj and README.Rmd outside the development directory, then there is no problem, but I find that solution somewhat dirty. Any ideas? Thanks, Jose Barrera Statistician, Associate Lecturer *IS**Global* Barcelona

[R-pkg-devel] Why .Rbuildignore doesn't ignore?

haven't had this issue when checking another package I recently and successfully sent to CRAN, so I have no idea why I get that NOTE now. I would appreciate any help to know why .Rbuildignore seems not to ignore those files. Thanks, Jose Barrera Statistician, Associate Lecturer *IS**Global* Barc

Re: [R-pkg-devel] Cache in vignette not working when checking a package

of "cache = TRUE" present in some chunks, as we can do locally. Best, Jose Barrera Statistician, Associate Lecturer *IS**Global* Barcelona Institute for Global Health - Campus MAR Barcelona Biomedical Research Park (PRBB) (Room Hypatia) Doctor Aiguader, 88 08003 Barcelona,

Re: [R-pkg-devel] Cache in vignette not working when checking a package

Many thanks for your help Thierry but unfortunately I can't see the link between your first reply and my issue (of course, that's my fault). Jose Barrera Statistician, Associate Lecturer *IS**Global* Barcelona Institute for Global Health - Campus MAR Barcelona Biomedical Research

Re: [R-pkg-devel] Cache in vignette not working when checking a package

Indeed, the "cache" folder is not present in the tar.gz file. Could you please help me on how to fix "the cache is not installed into the package"? Thanks, Jose Barrera Statistician, Associate Lecturer *IS**Global* Barcelona Institute for Global Health - Campus MAR Barcelona

Re: [R-pkg-devel] Cache in vignette not working when checking a package

he package. Best, Jose Barrera Statistician, Associate Lecturer *IS**Global* Barcelona Institute for Global Health - Campus MAR Barcelona Biomedical Research Park (PRBB) (Room Hypatia) Doctor Aiguader, 88 08003 Barcelona, Spain Tel. +34 93 2147383 jose.barr...@isglobal.org <https://www.li

[R-pkg-devel] Cache in vignette not working when checking a package

vignette in the R session and now it takes only 8 seconds, so the cache is working 7) Repeat 5) 8) Repeat 1) and 2) but it still takes 4 minutes so it seems like R CMD build and R CMD check are ignoring the "cache" folder in "collin/vignettes/". I would be very grateful if you