Josiah,
that test tests the accuracy of the system clock by querying
https://worldtimeapi.org/api/timezone/etc/UTC so my guess would be that you
have either network or proxy issues which cause that request to fail by
providing garbage instead of the actual response.
The call to test yourself
Thank you, Uwe for tagging me in. Huge thank you to Ivan for the detailed
analysis. This reflects what Max Coulter found in
https://github.com/thibautjombart/adegenet/issues/363. I just merged in
https://github.com/thibautjombart/adegenet/issues/363 yesterday and I
believe that should fix the issue
Thanks, Duncan!
It is produced before preparing the tarball. It’s just a way to automate
defining many 100ish functions that have the same structure. l run the
script manually when I want to update definitions.
There is not any auto-magical process that creates a file before the build
or instal
One question is when that file is produced. Do you produce it before
preparing the tarball, or is it produced as part of the installation
process?
Duncan Murdoch
On 2025-02-04 6:27 p.m., Josiah Parry wrote:
The file was written using writeLines() but it is just a normal R script
with normal
That was clear to me, and changes nothing about my comments.
On February 4, 2025 3:27:34 PM PST, Josiah Parry wrote:
>The file was written using writeLines() but it is just a normal R script
>with normal function definitions and is included in the R/ directory. The
>source code is just programmat
The file was written using writeLines() but it is just a normal R script
with normal function definitions and is included in the R/ directory. The
source code is just programmatically generated.
On Tue, Feb 4, 2025 at 14:54 Jeff Newmiller
wrote:
> Packages are supposed to work when mounted in a
Packages are supposed to work when mounted in a read-only filesystem... using
writeLines seems like a very bad idea since you can't assume the package
install is writeable when it is run, and running code from tmp is a security
hole.
If you absolutely cannot think of a way around running code f
I'm running R CMD check for my package {calcite} (source:
https://github.com/r-arcGIS/calcite) which is failing due to what *looks* like
a bug.
R CMD check fails at "checking for future file timestamps"
I get this error: ...Error in if (abs(unclass(now_local) -
unclass(now)[1]) > 300) missing va
On 4 February 2025 at 16:16, Graeme Hickey wrote:
| Having spent the best part of a month troubleshooting an almost
| identical issue, I came across Dirk's blog post here: https://
| dirk.eddelbuettel.com/blog/2023/10/31/. He discusses how to throttle the
number
| of threads, and exports 2 handy
Having spent the best part of a month troubleshooting an almost
identical issue, I came across Dirk's blog post here:
https://dirk.eddelbuettel.com/blog/2023/10/31/. He discusses how to
throttle the number of threads, and exports 2 handy functions in the
RcppArmadillo package, which you can use wit
Thank you, Jisca. I learned something new. Unfortunately the NOTE was not
being triggered by this, but rather somehow the package was using OpenMP. I
found the trick was to throttle the number of OpenMP threads courtesy of
Dirk Edubuettel's post here: https://dirk.eddelbuettel.com/blog/2023/10/31/.
On Tue, 4 Feb 2025 at 12:56, Uwe Ligges wrote:
>
>
>
> On 04.02.2025 12:46, Iñaki Ucar wrote:
> > @Ivan: Excellent anaylsis as always.
> >
> > @Bernd: So what can **you** do about it? You are using adegenet
> > correctly as Ivan pointed out, so IMHO CRAN should have requested
> > adegenet's mainta
On 04.02.2025 12:46, Iñaki Ucar wrote:
@Ivan: Excellent anaylsis as always.
@Bernd: So what can **you** do about it? You are using adegenet
correctly as Ivan pointed out, so IMHO CRAN should have requested
adegenet's maintainer to fix this. But since it's your package that is
on the line here,
@Ivan: Excellent anaylsis as always.
@Bernd: So what can **you** do about it? You are using adegenet
correctly as Ivan pointed out, so IMHO CRAN should have requested
adegenet's maintainer to fix this. But since it's your package that is
on the line here, I would put that example inside a dontrun{
В Sun, 2 Feb 2025 22:56:47 +
Bernd.Gruber пишет:
> READ of size 16 at 0x518000697ff0 thread T0
> #0 0x7f2e873ccfdf in bytesToDouble
> /tmp/RtmpNNPUz9/R.INSTALL3cef1f2b1bd39c/adegenet/src/snpbin.c:225:19
> #1 0x7f2e873ceca5 in snpbin2freq
> /tmp/RtmpNNPUz9/R.INSTALL3cef1f2b1bd39c/adegenet/
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