It is wrong to say that ‘it will never be solved for R.4.0.0’. Rather, ‘it will
never be a problem for R.4.0.0’.
rtracklayer 1.51.5 was only ever built, checked, distributed (and installed in
a correctly configured system, using the rules of install.packages and
tools:::.BioC_version_associated
I stand corrected about the R-devel version (and now R 4.1.0) on CRAN.
However, isn't it the case that it will never be solved for R 4.0.0 (to
become R-oldrel on CRAN) and CRAN will keep reporting an error on MS
Windows there because
https://bioconductor.org/packages/3.12/bioc/html/rtracklayer.htm
Hi Tomas, these are really helpful suggestions, which are not at all
discussed in the current Writing R Extensions, nor in CRAN Repository
Policy. Would you please consider adding this information to one of these
official sources of documentation?
On Fri, May 14, 2021 at 3:59 AM Tomas Kalibera
wr
That’s not correct Henrik.
CRAN follows CRAN rules for installing packages, so uses
tools:::BioC_version_for_R_version(). For R-devel we have
> R.version.string
[1] "R Under development (unstable) (2021-05-18 r80323)"
> tools:::.BioC_version_associated_with_R_version()
[1] '3.13'
For this versi
It's a problem with Bioconductor and a broken release history of
'rtracklayer' on MS Windows (e.g.
https://bioconductor.org/packages/3.12/bioc/html/rtracklayer.html)
plus how each Bioconductor version is tied to a specific R version.
In other words, even if they fix it in Bioconductor 3.13 (for R
4
To any who might have an idea:
I've been reading several posts in the digest about dependency version issues
on the check servers and I'm having my own issue, which I can't solve because I
can't upgrade the check server's package version:
* installing *source* package 'CNVScope' ...
** using sta
I see the same issue come up on rhub and the issue has also started showing
up for the previous version of the package. See results link below.
https://cran.r-project.org/web/checks/check_results_radiant.html
On Mon, May 17, 2021 at 6:10 AM Uwe Ligges
wrote:
> Perhaps simply ask the CRAN crew t
