On Sat, 27 Jan 2018, David Winsemius wrote:
John (to a serial querulant):
...but with such a sweeping lack of information from you, don't
congratulate yourself if you get a helpful answer. It wasn't your fault.
Looks like what H.L. Menken or P.G. Wodehouse would have written.
Rich
___
On Tue, 13 Mar 2018, Mark Leeds wrote:
See Hadley's advanced R
+1 A very well writte, highly useful book. Recommended.
Rich
__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE d
On Wed, 14 Mar 2018, Barry Rowlingson wrote:
Depending on your application, I'm not sure there's much point in being an
"advanced R programmer" these days. Become an adequate R programmer, and
learn C++ and Rcpp. Do basic data mashing in R, then do all your intensive
stuff in C++ with Rcpp. Even
On Wed, 14 Mar 2018, Duncan Murdoch wrote:
I'm all for learning more languages and using the one that's best for each
job, but for people who don't know Python, it would be helpful to list the
aspects in which it excels. When should an R user choose to write
something in Python instead?
Duncan
On Wed, 14 Mar 2018, Jeff Newmiller wrote:
Nothing you have said tells me you have LaTeX working (a binary install of
R does not depend on it), but if you actually know it is installed and
available to R then that isn't the problem. Since you have not said what
you actually did or what errors yo
On Thu, 15 Mar 2018, Peter Dalgaard via R-help wrote:
The build system rolled up R-3.4.4.tar.gz (codename "Someone to Lean On")
this morning.
Peter,
My thanks to all developers for the work you do.
Best regards,
Rich
__
R-help@r-project.org mai
R-3.5.0 is installed here. When I tried to update installed packages
errors were reported when their dependencies were built under a prior
version of R.
Reading ?update.packages() I did not see an option that would
automatically update dependences built under an earlier version of R. Is
there
On Sat, 26 May 2018, Bert Gunter wrote:
Is this warning in ?update.packages relevant?
Bert,
Short answer: no.
I have only a single R library here: /usr/lib/R/library.
I've tried 'install.packages("", dependencies = TRUE) and still
need to follow the dependencies chain down, re-install
On Sat, 26 May 2018, Duncan Murdoch wrote:
I think you want update.packages(ask = FALSE, checkBuilt = TRUE) to
automatically update all packages and their dependencies. With the default
checkBuilt=FALSE, R just sees whether a dependency is a high enough
version number. But packages installed und
I have daily precipitation data for 58 locations from 2005-01-01 through
2018-06-18. Among other plots and analyses I want to apply lattice's
xyplot() to illustrate the abundance and patterns of the data.
I've used a vector of colors (and a key) when there were only eight
weather stations and
A set of data files have this format:
date,time,elev
1988-10-01,00:30,87.6849
1988-10-01,01:00,87.6849
1988-10-01,01:30,87.6849
1988-10-01,02:00,87.6879
1988-10-01,02:30,87.6879
1988-10-01,03:00,87.691
1988-10-01,03:30,87.694
Importing it with this command:
allyears <- read.table('allyears.da
On Wed, 18 Jul 2018, David Winsemius wrote:
I would not destroy the possibility of using the original values:
David,
What are the benefits of keeping date and time as factors?
allyears$myDate <- as.Date(as.character(allyears$date))
allyears$myTime <- as.POSIXct(paste(allyears$date, allyea
On Wed, 18 Jul 2018, David Winsemius wrote:
It's not so much as factors but rather in a form that paste() will coerce
to character so you cna get the automatic format
David,
Now I understand.
Maybe you need to add a format string. It might force some of your pasted
date+time values to NA
On Wed, 18 Jul 2018, Rich Shepard wrote:
If you would suggest how many would be an acceptably large number I'll be
happy to put that on a 'cloud' sharing site and provide the URL to it.
I put a zipped data file at this URL:
<http://www.filecon
On Thu, 19 Jul 2018, Duncan Mackay wrote:
Try something like this
...
Duncan,
That's impressive and well beyond anything I've done in the past. I'll
study it to fully understand it and make it work for me.
I have put over 60 panels on an A4 page.
Space is a premium - you can reduce the
On Thu, 19 Jul 2018, Rich Shepard wrote:
I put a zipped data file at this URL:
<http://www.fileconvoy.com/dfl.php?id=g61a366bb8947de4319863935141c96f82092d4>
Since then I reformatted the file to two fields: date-time and elevation.
If anyone wants a copy send me a message off th
On Thu, 19 Jul 2018, Rich Shepard wrote:
Since then I reformatted the file to two fields: date-time and elevation.
If anyone wants a copy send me a message off the list and I'll respond with
the modified file attached.
This is a mistake. The file needs commas separating each field.
On Thu, 19 Jul 2018, Berry, Charles wrote:
So roughly 5000 observations of latitiude, longitude, elevation(?), and
amount.
Maybe something dynamic like Hans Rosling does:
https://towardsdatascience.com/how-to-build-animated-charts-like-hans-rosling-doing-it-all-in-r-570efc6ba382
possibly smoo
On Thu, 19 Jul 2018, Rich Shepard wrote:
I have the date and elev columns converted from factors to date and
numeric, respectively, but still have not learned how to convert the time.
With this dataframe structure,
str(wy2018)
'data.frame': 12592 obs. of 3 variables:
$
On Thu, 19 Jul 2018, David Winsemius wrote:
I took the code that I offered earlier and replaced allyears with wy2018:
date timeelev myDate myTime
1 2017-10-01 00:00 290.298 2017-10-01 2017-10-01 00:00:00
2 2017-10-01 00:30 290.301 2017-10-01 2017-10-01 00:30:00
3
On Thu, 19 Jul 2018, David Winsemius wrote:
You can use format to only display the time portion of a datetime object.
format( Sys.time(), "%H:%M")
[1] "13:57"
You can append the current date to a "time-only" character value and as.POSIXct
will do that for you:
as.POSIXct("00:00", format="%H:%M"
I have 30 data files that all need to be read into R, formatted, and have
scatter plots prepared. This process can be done in a short script. I would
like to generalize the script so that variables (such as data file names)
can be read from another file and all files processed sequentially, simi
On Thu, 19 Jul 2018, David Winsemius wrote:
https://markmail.org/search/?q=list%3Aorg.r-project.r-help+script+process+multiple+csv+files
https://stackoverflow.com/questions/11433432/importing-multiple-csv-files-into-r
https://www.google.com/search?q=use+r+to+process+multiple+csv+files&oq=use+r+t
On Thu, 19 Jul 2018, William Michels wrote:
Hello, In addition to Duncan Mackay's excellent suggestion, I would
recommend Bert Gunter's "stripless" package, for high-density Trellis-type
conditioning plots. See the vignette for examples, and try out the code
for "earthquake" and "barley" plots f
On Fri, 20 Jul 2018, Duncan Mackay wrote:
If you have to make several plots you can subset your data
Duncan,
That's what I thought I should do.
xyplot(... data = subset(x, condition), ...)
or
XYn <- xyplot(... data = x[row1:row2, ], ...)
in a loop
have a look a ? print.trellis
if you wa
The structure of the dataframe is
str(wy2016)
'data.frame': 8784 obs. of 4 variables:
$ date : chr "2015-10-01" "2015-10-01" "2015-10-01" "2015-10-01" ...
$ time : chr "00:00" "01:00" "02:00" "03:00" ...
$ elev : num 90.7 90.7 90.7 90.7 90.7 ...
$ myDate: Date, format: "2015-10-01"
On Fri, 20 Jul 2018, William Dunlap wrote:
The problem occurs because no commonly used format works on all your date
strings. If you give as.POSIXlt the format you want to use then items that
don't match the format will be treated as NA's. Use is.na() to find them.
Bill,
No NAs found using
On Fri, 20 Jul 2018, William Dunlap wrote:
Which format did you use when you used is.na on the output of
as.POSIXlt(strings, format=someFormat)
and found none? Did the resulting dates look OK? Perhaps
all is well.
Bill,
All dates here are kept as -mm-dd.
And each dataframe row ha
On Fri, 20 Jul 2018, David Winsemius wrote:
I don't think you read Bill's message properly.
David,
Obviously not.
He was not saying that there were NA's; he was telling you to use a format
specification in your as.POSIXct call and the the result of that call
would have NA's.
wy2016$dt_ti
On Fri, 20 Jul 2018, Eric Berger wrote:
This may not be the most efficient but it will identify the offenders.
foo <- paste(wy2016$date, wy2016$time))
uu <- sapply(1:length(foo),
function(i) { a <- try(as.POSIXct(foo[i]),silent=TRUE)
"POSIXct" %in% class(a) })
which
On Fri, 20 Jul 2018, David Winsemius wrote:
wy2016$dt_time <- with( wy2016, as.POSIXct( paste( date, time ) , format=
"%Y-%m-%d %H:%M") )
David/Bill/Eric:
Thank you all. I found the typos which covered a single day toward the end
of the dataframe.
Carpe weekend,
Rich
On Fri, 20 Jul 2018, William Dunlap wrote:
You mean each line in the file, not row in data.frame, has the form
"year-month-day,hour:min,numericValue". Try the following, where tfile
names your file:
Bill,
Yes, I was looking at the data file in one emacs buffer and my R session
in another on
On Fri, 20 Jul 2018, Rich Shepard wrote:
Thank you all. I found the typos which covered a single day toward the end
of the dataframe.
FWIW, all these data came from PDF reports and had to be manually
highlighted and pasted into a text file. Given 29 years of hourly (and
sometimes half
On Fri, 20 Jul 2018, William Dunlap wrote:
To find the lines in the file, tfile, with bogus dates, try
readLines(tfile)[ is.na(dataFrame$DateTime) ]
Bill,
Thanks for another lesson.
Regards,
Rich
__
R-help@r-project.org mailing list -- To UN
On Sun, 22 Jul 2018, Serena De Stefani wrote:
I need to automate a process in R. Basically I have a an R script (I will
call it R1) that needs three separate files to run. These three files are
the results output of one trial in my study.
The trials are specified by the labels: AA AB AM BA BB
Within R one can use source() to run a batch file of R commands, while R CMD
BATCH
and Rscript are run from the command line. Is this correct?
Given these choices, when would I want to run a script within R using
source(), and when would it be better for me to run it from the command
line?
On Wed, 25 Jul 2018, Bert Gunter wrote:
"Within R one can use source() to run a batch file of R commands, while R
CMD BATCH and Rscript are run from the command line. Is this correct?"
Yes.
Bert,
Thanks for confirming.
I think your query answers your query: You use Rscript when you want
On Wed, 25 Jul 2018, Rich Shepard wrote:
That's a given. Why would I prefer Rscript over R CMD BATCH, or
vice-versa? I did not see much difference between the two in their help
files.
Digging deeper into the Web I read that R CMD BATCH is an older approach
to automating R processing
On Wed, 25 Jul 2018, MacQueen, Don wrote:
From my perspective, which is a unix-alike perspective, Rscript makes R
useable in exactly the same way as other unix style scripting languages
such as perl, tcsh, bash, etc. This is useful, and a good thing. If I
remember (and understood) correctly, it
On Wed, 25 Jul 2018, Eric Berger wrote:
1. For R scripts you should also consider the package littler developed by
Dirk Eddelbuettel, Highly recommended. For info
http://dirk.eddelbuettel.com/code/littler.html or the github repository.
Eric,
I'll definintely look at that package.
2. Scrip
On Wed, 25 Jul 2018, Eric Berger wrote:
You should be able to do all this within R. From what you have written I
don't see a compelling reason to use scripts at the shell level.
Eric,
The source() help page's last example calls a set of scripts to run
sequentially. I assume this is used to
On Wed, 25 Jul 2018, Bert Gunter wrote:
Eric may have more to say, but the straightforward answer is: use
functions to do what you want and pass any file specific info to them as
parameters of function calls.
Bert,
I was considering that functions would be the way to go. The functions can
c
On Wed, 25 Jul 2018, Shawn Way wrote:
To get you start, here's a script I used to combine any number of files
into one data.frame.
library(knitr)
library(tidyverse)
library(xlsx)
library(xtable)
library(lubridate)
# create a list from these files
list.filenames<-list.files(pattern=".CSV$") #
On Wed, 25 Jul 2018, David Winsemius wrote:
# create a list from these files
list.filenames<-list.files(pattern=".CSV$") # This gets a list of all CSV files
It would get all the files with all caps "CSV" anywhere within the file
name, but it would not get any files with an extension ".csv", n
I used to be subscribed to the ess SIG, but cannot find any saved messages
from that list and I cannot find it in the list of mail lists on the r-project
web site. So I'll ask here.
Running ess-5.14 on emacs-25.3 I'm seeing a different behavior when I
write scripts than I had seen in the past
On Thu, 26 Jul 2018, Anthony Hirst wrote:
I don't know the answer but here is the info for the ess list.
ess-h...@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/ess-help
Anthony,
Thanks! I thought that was the name but did not see it on the help page
and didn't think of lo
On Thu, 26 Jul 2018, Marc Schwartz wrote:
The full list of e-mail lists is here:
https://stat.ethz.ch/mailman/listinfo/
and the ESS-Help list is here:
https://stat.ethz.ch/mailman/listinfo/ess-help
which is also referenced on the ESS web site:
http://ess.r-project.org/index.php?Section=gettin
On Thu, 26 Jul 2018, jeremieju...@gmail.com wrote:
Do you use single # or double hash ## when you comment? as far as i know
there are 3 types of comment indentation on ESS.
#
##
###
In principle comment with # get centered.
Jeremie,
I was not aware of this I've always used a single # for c
On Thu, 26 Jul 2018, Marc Schwartz wrote:
There is a reasonable chance that your ESS version, given its age, may be
incompatible with some of the under the hood changes in Emacs since then,
including changes to variable names, etc.
Marc,
The build script fails because it cannot find an info
On Thu, 26 Jul 2018, Rich Shepard wrote:
I was not aware of this I've always used a single # for comment
everywhere that's the correct symbol. I'll try two of 'em.
Reading the 17.11 user guide I see what #, ##, and ### do. I also put the
suggested line to remove t
On Fri, 27 Jul 2018, Eric Berger wrote:
I also use emacs with ESS for editing R files and I have been living with
the comment indentation problem you described. Based on the comments in
this thread I did a search and found a posted solution that works for me.
See https://stat.ethz.ch/pipermail/e
I want to save the output of summary(df_name) to a disk file and my
research found that the sink() function is what I want to use. The 'R Cookbook'
provides a an alternative example using cat() to a connection. Here,
con <- file("wysumallyrs.txt", "w")
cat(summary(wyallyrs), file=con)
close(con
On Sun, 21 May 2017, Peter Carbonetto wrote:
The error occurs only when I do "make clean" followed by "make" again;
make works the first time.
Peter,
I suggest you use 'make distclean' rather than 'make clean.' There are
subtle differences between the two, yet the former is more complete. T
On Wed, 7 Sep 2016, Doran, Harold wrote:
I'm building a large program with many different people contributing to
the coding in R and so it needs a well-articulated design spec. The
program will have many different functions that must interact with each
other, but the individual functions will be
After hours of looking for the reason why one data set plots correctly and
another one does not I am still not seeing the reason. The only differences
I see between the two data sets is the number of discrete variables (one has
6 years, the other 7 years) and one contains zeros. I wonder if the
Plots of compositional data ternary diagrams do not accept the main label
within the plot() function, but do print the label when it is specified
within the title() function. On some of these plots I need to raise the
position of the title just enough to move the text above the top row of
diagra
On Fri, 1 May 2015, David L Carlson wrote:
There are half a dozen implementations of ternary plots in as many R
packages so it is hard to be specific.
David,
I'm using the compositions() package.
Since you are using title(), try the "further graphical parameters from
par" mentioned in the
On Fri, 1 May 2015, David L Carlson wrote:
Add plotMissings=FALSE to the second plot and see the plot.acomp manual
page description of this argument:
plot(JerrittY, pch=as.numeric(JerrittX4), col=c("black","red", "dark green",
"dark blue","dark goldenrod","dark orange","dark grey")[JerrittX
On Fri, 1 May 2015, David L Carlson wrote:
There are half a dozen implementations of ternary plots in as many R
packages so it is hard to be specific. Since you are using title(), try
the "further graphical parameters from par" mentioned in the manual page
such as adj=c(x, y) for position (or ma
I'm starting to put code in multi-use functions rather than in individual
scripts and have not learned how to invoke the function from the command
line. If this information is in Norman Matloff's 'The Art of R Programming'
or Hadley Wickham's 'Advanced R' please point me to the proper place.
On Thu, 7 May 2015, Bert Gunter wrote:
See e.g. Chapter 10.4 in the "Intro to R Tutorial" on the "..." argument.
Bert,
Thanks. That was going to be my next step.
Much appreciated,
Rich
__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and
On Thu, 7 May 2015, Clint Bowman wrote:
as in source("pairwise-plots-continuous-vars.R")
Clint,
I did this before converting it to a function, when I modified the
variables in the script. Did not try it as a function, should have.
Thanks,
Rich
I'm running linear regressions and ANOVAs on 5 sets of compositional data
following van den Boogaart and Tolosana-Delgado's book, pp. 129 ff. Four of
the five data sets compute without error; one does not. To test results,
load package 'compositions'.
The input data:
structure(c(0.1896810318
R packages here are installed in /usr, not /usr/local/. Most of the time
when I run 'update.packages()' each finds headers in /usr/include. Today,
the package 'rgl' failed to build because it was looking for freetype.h in
/usr/local/include/freetype2/.
By making a softlink from /usr/include/f
The results of compositional ANOVA models with several main effects with
conditional data as the response variable produce 'missing not at random'
(MNAR) results for the same rows in the matrix of output coefficients: the
last, third from last, and fourth from last regardless of the number of
ye
On Fri, 22 May 2015, varun joshi wrote:
What should I do to learn gradually?
Not sure how one gradually learns; I suppose it depends on what sort of
applications one wants to develop and the most effective means by which one
learns. Regardless, a good place to start is by buying and reading
On Thu, 4 Jun 2015, T.Riedle wrote:
Error: package 'sandwich' could not be loaded
I have no idea why this happens. I have not done anything before.
Er, the answer is shown.
What can I do to solve this problem?
Install the latest sandwich (hold the mayo), then re-install the package
req
Data file 'example.dat' has this format:
stream,sampdate,param,quant
B,1992-03,Cl,4
B,1992-03,SO4,33
B,1992-03,pH,8.43
B,1992-04,Cl,4
B,1992-04,SO4,32
B,1992-04,pH,8.46
B,1992-05,Cl,4
B,1992-05,SO4,31
B,1992-05,pH,8.43
It's read into R with
allchem <- read.table('example.dat', stringsAsFacto
On Fri, 26 Jun 2015, Rich Shepard wrote:
allchem$sampdate <- as.yearmon(format(%Y-%m))allchem$sampdate
Reading the yearmon help page again led me to try
allchem$sampdate <- as.yearmon(allchem$sampdate)
which produces the following structure:
'data.frame':
On Fri, 26 Jun 2015, MacQueen, Don wrote:
I would have just assigned them all to the first day of the month, using
as.Date( paste0(allchem$sampdate,'-01') )
(or maybe the middle of the month represented by the 15th)
and then had a variable that was of the Date class in the base R (with
which I
Moving from interactive use of R to scripts and functions and have bumped
into what I believe is a problem with variable names. Did not see a solution
in the two R programming books I have or from my Web searches. Inexperience
with ess-tracebug keeps me from refining my bug tracking.
Here's a
On Tue, 30 Jun 2015, Steve Taylor wrote:
Using return() within a for loop makes no sense: only the first one will be
returned.
Steve,
Mea culpa. Didn't catch that.
How about:
alldf.B = subset(alldf, stream=='B') # etc...
I used to do each stream manually, like the above, and want to
On Mon, 29 Jun 2015, David Winsemius wrote:
No. A pointer to the correct use of "[" is needed.
Thanks, David. This puts me on the the right path.
Much appreciated,
Rich
__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https:/
On Tue, 30 Jun 2015, Rolf Turner wrote:
If you want a pointer to the correct syntax for subset(), try
help("subset")!!!
The syntax of your "extstream" function is totally screwed up, convoluted and
over-complicated. Note that even if you had your "subset" argument specified
correctly, the re
Lattice's bwplot() displays and prints (using pdf()) the box.rectangle and
box.umbrella in a pale blue that is a pale gray on b&w laser printer output.
I would like to set default options so the box and whiskers are displayed
and printed in black by modifying ~/.Rprofile by adding a .First() fun
On Thu, 2 Jul 2015, David Winsemius wrote:
The lead-in to section 7.2 mentions `trellis.par.get`, but in order to
change anything you need to use `trellis.par.set` as was illustrated in
the pages leading up to that section:
David,
I saw `trellis.par.set` but did not know how to use that in
On Thu, 2 Jul 2015, David Winsemius wrote:
My .Rprofile has this (among other items):
...
David,
My attempts at adding lattice.options to .Rprofile fail. In that file is
lattice.options(trellis.par.set(list(
box.umbrella=list(col="black"),
box.rectangle=l
On Thu, 2 Jul 2015, Rich Shepard wrote:
... and invoking R within emacs ...
Trying a different approach:
bwplot(quant ~ param, data = b, main = 'Stream B Constituents',
ylab = 'Concentration (mg/L)', xlab = 'Constituent', par.settings =
simpleTh
On Thu, 2 Jul 2015, Bert Gunter wrote:
1. box.rectangle, etc. are not functions; they are (lists of)
parameters that are sublists of the par.settings list.
Bert,
Thought so ...
2. Read the Help for simpleTheme() -- it has a specific list of
parameters which is nothing like what you show.
On Fri, 3 Jul 2015, Duncan Mackay wrote:
I usually avoid global settings as they may change between graphs therefore
I use the par.settings in each plot
My settings are
...
Duncan,
Thank you very much. Sound advice and excellent example.
I suspect that part of my issues with tryin
On Sat, 4 Jul 2015, Duncan Mackay wrote:
Just a thought
Have you set pch colour values somewhere else?
Duncan,
Not on purpose.
see also https://stat.ethz.ch/pipermail/r-help/2010-March/230329.html
Will do.
Thanks,
Rich
__
R-help@r-project
Hadley's ggplot2 book is quite old and a new version is in the works, but
not yet out. I've been using lattice graphics but the knitr package doesn't
support lattice, only basic plots and ggplot2. My Web searches for Trellis
plots in ggplot2 equivalent to those in lattice have not been productiv
On Fri, 10 Jul 2015, Roy Mendelssohn - NOAA Federal wrote:
Don’t know for certain but might this help:
http://journal.r-project.org/archive/2015-1/murrell.pdf
From the latest issue of R Journal.
Roy,
Thanks. I'll certainly read that article.
Carpe weekend,
Rich
__
On Fri, 10 Jul 2015, Roy Mendelssohn - NOAA Federal wrote:
Don’t know for certain but might this help:
It's very interesting, but does not appear to resolve the immediate need
to write the R code in a knitr chunk for incorporation into the compiled LyX
document.
The gridGraphics package d
On Fri, 10 Jul 2015, Hadley Wickham wrote:
Have you tried explicitly print()ing the lattice graphics in your knitr
doc?
Hadley,
Only now. Had not thought of trying this before.
pdf('carlin-1-descriptive.pdf')
print(xyplot(value ~ sampdate | variable, data=carlin.1.melt, rm.na = T))
No err
On Fri, 10 Jul 2015, Hadley Wickham wrote:
You shouldn't be explicitly opening a device in a knitr document.
Hadley,
Didn't think so.
I think maybe you should post a minimal document so we can figure out
what's going wrong.
Agreed. Attached are the raw data (carlin.csv) and a stripped
On Fri, 10 Jul 2015, David Winsemius wrote:
#Generally one needs to complete a pdf() call with:
dev.off()
# And an empty file is the symptom os such a failure.
David,
I did leave that off the example file, but it make no difference. The
attached is the compiled example.pdf
Rich
example
On Fri, 10 Jul 2015, Yihui Xie wrote:
Your LyX example has two problems: 1) We don't have your .RData; 2) You
didn't library(reshape) and library(lattice). Hence it is not a
self-contained reproducible example.
Yihui,
I assumed that reading in the *.csv file would create a local .RData file
On Fri, 10 Jul 2015, Yihui Xie wrote:
Your LyX example has two problems:
Yihui, et al.:
All fixed now. After adding the specific libraries the chuck calling
xyplot() to produce the graphic caused an error when I tried to generate a
dvips preview:
LaTeX Error: File 'figure/unnamed-chunk-7-1
On Sat, 11 Jul 2015, Yihui Xie wrote:
I guess you didn't tell us you were compiling the document with dvips
That's how I preview lyx docs for the past decade-and-a-half or so. The
final .pdf is generated with pdflatex.
There is now an issue when a second figure is added to the document: i
On Sat, 11 Jul 2015, Rich Shepard wrote:
Attached are the .RData file from the cwd, the test.lyx file (lyx-2.1.3),
and the two test files from /tmp/.../lyx_tmpbuf3/.
The .RData and .lyx files were stripped off. I'll try sending them again.
Rich#LyX 2.1 created this file. For more inf
On Sat, 11 Jul 2015, Rich Shepard wrote:
The .RData and .lyx files were stripped off. I'll try sending them again.
.RData didn't make it. Perhaps now.
Rich
__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://st
On Sat, 11 Jul 2015, Yihui Xie wrote:
There is a ')' missing in the end. When you see errors from parse(),
that often means the code is not syntactically correct.
Most sincere appologies for my not catching that each time I looked at the
code. Will be more thorough and put the problem aside
The compositional data have been divided into two data frames: 46 response
variables (the compositional components) and 5 explanatory variables. There
are 209 observations of each. With no experience analyzing large
compositions with so many parts your advice on how to plot and report
results of
On Fri, 17 Jul 2015, Aaron Mackey wrote:
One immediate question is how independent you believe the 46 components to
be, and whether certain components could be reduced or otherwise
coordinately-modeled; a heatmap of your 46x46 pairwise correlations should
be informative. Also consider log-scalin
On Fri, 17 Jul 2015, John Kane wrote:
I think this is more a technical question for the subject matter experts
than for R-help if I am understanding the question correctly.
John,
I agree completely. Unfortunately, there is no R SIG devoted to CoDA, nor
any other mail list or Web forum that
On Fri, 17 Jul 2015, John Kane wrote:
Then it sounds like you are one of the experts. Do whatever you think
appropriate and either set the standard for future research or get enough
feedback to do even better next time. :)
John,
Far from an expert, but becoming more capable with each projec
On Fri, 17 Jul 2015, Bert Gunter wrote:
I believe John Aitchison's book and papers are the authoritative basic
resources. Have you read them?
Bert,
Yes, I have.
The problem is that the support of the distributions are (hyper)simplexes,
not Euclidean space, due to the requirement that the
Near the beginning of a LyX document I have a knitr chunk with options
that begin with 'global_options', and includes echo=F. This presents the R
code in that chunk from displaying in the compiled PDF file. However, all
following knitr chunks are included in the PDF file.
Reading the docs (in
On Mon, 20 Jul 2015, Thierry Onkelinx wrote:
Have you tried echo = FALSE instead of echo = F. If that doesn't solve
your problem, please provide a minimal reproducible example.
Yes, I have.
Attached is a TeX file renamed to sample.txt (rather than .tex to ensure
it is not stripped), a PDF
1 - 100 of 745 matches
Mail list logo
