Could be few things but we probably need some sample data to get a feeling for
what you are doing.
The easiest way to supply data is to use the dput() function. Example with
your file named "testfile":
dput(testfile)
Then copy the output and paste into your email. For large data sets, you
Posting guide warns you to provide a reproducible example, which would include
enough data to test code.
As a general point of information I can say that data ordering in R graphs is
normally driven by the factor level ordering, and you usually have to specify
that explicitly when you convert f
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