Re: [R] hdf5 package segfault when processing large data

Hi Budi and Bill, As a workaround, you could try setting your stack limit to a larger limit (ulimit -s). I'll change that to a heap allocation. Thanks, Marcus William Dunlap wrote: This is probably due to the code in hdf5.c allocating a huge matrix, buf, on the stack with 883

Re: [R] hdf5 package segfault when processing large data

> -Original Message- > From: r-help-boun...@r-project.org > [mailto:r-help-boun...@r-project.org] On Behalf Of Budi Mulyono > Sent: Monday, August 24, 2009 3:38 AM > To: r-help@r-project.org > Subject: [R] hdf5 package segfault when processing large data > > Hi there, > > I am currently