Re: [R] hclust/dendrogram merging

2013-09-16 Thread Peter Langfelder
Joshua, I'm not sure I understand your aim correctly, but if I do, here's my advice: If you are able to find the clusters according to rows or columns using clustering, you must be using some kind of a distance matrix that encodes whether two antibodies should be in one bin for rows, and a similar

Re: [R] hclust/dendrogram merging

2013-09-16 Thread Thomas Parr
Josh, A couple of things: 1) It would be helpful if you can provide some reproducible data and the code you have developed thus far. 2) This is more of a stackexchange.com or crossvalidated.com question. That said...without seeing the data... Dendrograms/hclust are generated by using a distance ma