Re: [R] memory allocation problem

2016-12-06 Thread Jeff Newmiller
Buy more memory? Do something different than you were doing before the error occurred? Use a search engine to find what other people have done when this message appeared? Follow the recommendations in the Posting Guide mentioned in the footer of this and every post on this mailing list? -- Sen

Re: [R] Memory allocation problem (again!)

2012-02-08 Thread Ernest Adrogué
8-02-2012, 22:22 (+0545); Christofer Bogaso escriu: > And the Session info is here: > > > sessionInfo() > R version 2.14.0 (2011-10-31) > Platform: i386-pc-mingw32/i386 (32-bit) Not an expert, but I think that 32-bit applications can only address up to 2GB on Windows. -- Bye, Ernest _

Re: [R] Memory allocation problem (again!)

2012-02-08 Thread Justin Haynes
32 bit windows has a memory limit of 2GB. Upgrading to a computer thats less than 10 years old is the best path. But short of that, if you're just generating random data, why not do it in two or more pieces and combine them later? mat.1 <- matrix(rnorm(5*2000),nrow=5) mat.2 <- matrix(rno

Re: [R] Memory allocation problem

2011-04-08 Thread Joshua Wiley
Hi Felipe, On Fri, Apr 8, 2011 at 7:54 PM, Luis Felipe Parra wrote: > Hello, I am runnning  a program on R with a "big" number of simulations and > I am getting the following error: > > Error: no se puede ubicar un vector de tamaño  443.3 Mb > > I don't understand why because when I check the mem

Re: [R] memory allocation problem

2010-11-03 Thread Jonathan P Daily
Or do we, what's the word... imbue it." - Jubal Early, Firefly From: Lorenzo Cattarino To: David Winsemius , Peter Langfelder Cc: r-help@r-project.org Date: 11/03/2010 03:26 AM Subject: Re: [R] memory allocation problem Sent by: r-help-boun...@r-project.org Thanks for all yo

Re: [R] memory allocation problem

2010-11-03 Thread Lorenzo Cattarino
help anyway Lorenzo -Original Message- From: David Winsemius [mailto:dwinsem...@comcast.net] Sent: Wednesday, 3 November 2010 12:48 PM To: Lorenzo Cattarino Cc: r-help@r-project.org Subject: Re: [R] memory allocation problem Restart your computer. (Yeah, I know that what the help-desk always says.)

Re: [R] memory allocation problem

2010-11-03 Thread Lorenzo Cattarino
much appreciated Lorenzo -Original Message- From: Lorenzo Cattarino Sent: Wednesday, 3 November 2010 2:22 PM To: 'David Winsemius'; 'Peter Langfelder' Cc: r-help@r-project.org Subject: RE: [R] memory allocation problem Thanks for all your suggestions, This is what I

Re: [R] memory allocation problem

2010-11-02 Thread Peter Langfelder
Oops, I missed that you only have 4GB of memory... but since R is apparently capable of using almost 10GB, either you actually have more RAM, or the system is swapping some data to disk. Increasing memory use in R might still help, but also may lead to a situation where the system waits forever fo

Re: [R] memory allocation problem

2010-11-02 Thread David Winsemius
Restart your computer. (Yeah, I know that what the help-desk always says.) Start R before doing anything else. Then run your code in a clean session. Check ls() oafter starte up to make sure you don't have a bunch f useless stuff in your .Rdata file. Don't load anything that is not german

Re: [R] memory allocation problem

2010-11-02 Thread Peter Langfelder
You have (almost) exhausted the 10GB you limited R to (that's what the memory.size() tells you). Increase memory.limit (if you have more RAM, use memory.limit(15000) for 15GB etc), or remove large data objects from you session. Use rm(object), the issue garbage collection gc(). Sometimes garbage co

Re: [R] Memory allocation problem (during kmeans)

2008-09-09 Thread Peter Dalgaard
rami batal skrev: > Dear all, > > I am trying to apply kmeans clusterring on a data file (size is about 300 > Mb) > > I read this file using > > x=read.table('file path' , sep=" ") > > then i do kmeans(x,25) > > but the process stops after two minutes with an error : > > Error: cannot allocate vect

Re: [R] Memory allocation problem

2008-08-12 Thread Roland Rau
Jamie Ledingham wrote: becomes too much to handle by the time the loop reaches 170. Has anyone had any experience of this problem before? Is it possible to 'wipe' R's memory at the end of each loop - all results are plotted and saved or written to text file at the end of each loop so this may b

Re: [R] Memory allocation problem

2008-08-12 Thread Kerpel, John
See ?gc - it may help. -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Jamie Ledingham Sent: Tuesday, August 12, 2008 9:16 AM To: r-help@r-project.org Subject: [R] Memory allocation problem Dear R users, I am running a large loop over about 400 files. To