Re: [R] 3.0.1 update and compiler package

2013-06-04 Thread Ranjan Maitra
Hi, Did you try: update.packages(installed.packages()[,1]) or install.packages(installed.packages()[,1]) This will reinstall the packages you have on your system and for which updates for 3.0.1 exist. In my experience, as recounted here earlier, update.packages() does not always work: it bre

Re: [R] 3.0.1 update and compiler package

2013-06-04 Thread Simon Zehnder
Hi Christoph, so what you could try to make sure it can run easily on your system is to install it from sources: First check if you have at least gcc version 4.7.2: gcc --version Open a terminal and type wget ftp://ftp.stat.math.ethz.ch/Software/R/R-patched.tar.gz tar -zxvf R-patched.tar.gz m

Re: [R] 3.0.1 update and compiler package

2013-06-04 Thread Prof Brian Ripley
On 04/06/2013 10:50, Christoph Knapp wrote: Usually sudo apt-get install ... Sometimes synaptic package manager. I'm using the So you really do need to discuss this on R-sig-debian, as those OSes have their own non-R package layout. Do not expect the R manuals to cover the changes made by th

Re: [R] 3.0.1 update and compiler package

2013-06-04 Thread Christoph Knapp
Usually sudo apt-get install ... Sometimes synaptic package manager. I'm using the /http://cran.ma.imperial.ac.uk/bin/linux/ubuntu/precise/ http://cran.stat.ucla.edu/bin/linux/ubuntu/precise repositories. Not sure what the differences are. I had some problems before when I installed packages fr

Re: [R] 3.0.1 update and compiler package

2013-06-04 Thread Simon Zehnder
Hi Christoph, do you install from sources? Best Simon On Jun 4, 2013, at 10:41 AM, Christoph Knapp wrote: > Hi, > reinstalling R did not help. It still will not update the same packages. I > attached the terminal output. There were no errors while I was installing R > again. I might have

Re: [R] 3.0.1 update and compiler package

2013-06-03 Thread Pascal Oettli
My mistake, Regards, Pascal On 06/03/2013 04:37 PM, Uwe Ligges wrote: On 03.06.2013 07:19, Pascal Oettli wrote: Hi, How did you upgraded your version of R? From source or from a Linux package? Actually the new R installation is just broken. It simply has to be reinstalled carefully (watch

Re: [R] 3.0.1 update and compiler package

2013-06-03 Thread Uwe Ligges
On 03.06.2013 07:19, Pascal Oettli wrote: Hi, How did you upgraded your version of R? From source or from a Linux package? Actually the new R installation is just broken. It simply has to be reinstalled carefully (watch for errors). Best, Uwe Ligges Regards, Pascal On 05/31/2013

Re: [R] 3.0.1 update and compiler package

2013-06-02 Thread Pascal Oettli
Hi, How did you upgraded your version of R? From source or from a Linux package? Regards, Pascal On 05/31/2013 11:33 AM, Christoph Knapp wrote: Hi, I recently updated to R 3.0.1. I'm running linux ubuntu 12.04. I realized that I have to update all the installed packages so I run > update.pack

Re: [R] 3.0.1 update and compiler package

2013-06-02 Thread Christoph Knapp
Hello, would it be possible to make a decision whether this forwarded to the list or declined. Its now 2 days. Thanks Christoph On 31/05/13 14:33, Christoph Knapp wrote: Hi, I recently updated to R 3.0.1. I'm running linux ubuntu 12.04. I realized that I have to update all the installed pac