Re: [R] using BLAT in r

2010-04-11 Thread Uwe Ligges
If this is the mail tools called blat: I use it with shell() calls all the time even for sending out automatical notifications for the CFAN build service. Note that there is also the "sendmailR" package gthat can send out messages without need for some additional 3rd party software... Uwe Li

Re: [R] using BLAT in r

2010-04-11 Thread Paul Hiemstra
Fahim wrote: I am trying to use blat in R. I couldn't find any package in CRAN or bioconductor. I downloaded the windows executable from Jim Kent's (from ucsc) webpage. I was wondering how to use/call these executables or functions embedded in these executables. I am seeking for some direction o

[R] using BLAT in r

2010-04-10 Thread Fahim
I am trying to use blat in R. I couldn't find any package in CRAN or bioconductor. I downloaded the windows executable from Jim Kent's (from ucsc) webpage. I was wondering how to use/call these executables or functions embedded in these executables. I am seeking for some direction or some materia

[R] using BLAT in r

2010-04-10 Thread Fahim Md
Does anyone know how to use BLAT(Blast-Like alignment tool) in R? Thanks and regards. -- Fahim [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting gui