Re: [R] rcorr p-values for pearson's correlation coefficients

2010-05-17 Thread Bryan Yu
Amit gmail.com> writes: > > Hi! All, > > To find co-expressed genes from a expression matrix of dimension (9275 > X 569), I used rcorr function from library(Hmisc) to calculate pearson The code itself is correct. I have tried it on my computer. About the Pvalue, FDR may be needed. _

[R] rcorr p-values for pearson's correlation coefficients

2010-05-05 Thread Amit
Hi! All, To find co-expressed genes from a expression matrix of dimension (9275 X 569), I used rcorr function from library(Hmisc) to calculate pearson correlation coefficient (PCC) and their corresponding p-values. From the correlation matrix (9275 X 9275) and pvalue matrix (9275 X 9275) obtained