Re: [R] psychometric functions

2008-08-25 Thread Victor Hernando Cervantes Botero
Hi, 2008/8/21 Mario Maiworm <[EMAIL PROTECTED]> > Hi, > I want to fit some psychophysical data with cumulative gaussians. There is > quite a convenient toolbox for matlab called 'psignifit' (formerly known as > 'psychofit'). It allows the lower bound of the sigmoid to vary slightly > from > zero,

Re: [R] psychometric functions

2008-08-22 Thread Mario Maiworm
__ >>> -Original Message- >>> From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] >>> project.org] On Behalf Of Paul Artes >>> Sent: Thursday, August 21, 2008 5:37 PM >>> To: r-help@r-project.org >>> Subject: Re: [R] psychometric f

Re: [R] psychometric functions

2008-08-21 Thread Jonathan Baron
On 08/21/08 17:48, Mario Maiworm wrote: > >>> Two comments. First, it isn't clear to me why you want the upper > >>> bound to differ from 1. Apparently you have some theoretical reason > >>> for using a cumulative gaussian. Wouldn't the same theory tell you > >>> that the upper bound should be 1

Re: [R] psychometric functions

2008-08-21 Thread Mario Maiworm
>>> Two comments. First, it isn't clear to me why you want the upper >>> bound to differ from 1. Apparently you have some theoretical reason >>> for using a cumulative gaussian. Wouldn't the same theory tell you >>> that the upper bound should be 1? the reason why I use cumulative gaussians is

Re: [R] psychometric functions

2008-08-21 Thread Paul Artes
There is a nice paper by Yssaad-Fesselier and Knoblauch on "Modelling Psychometric Functions in R". http://hal.archives-ouvertes.fr/docs/00/13/17/99/PDF/B125.pdf You might also be interested in this: http://www.journalofvision.org/5/5/8/article.aspx which comes from the same group as the psignifi

Re: [R] psychometric functions

2008-08-21 Thread Christian Ritz
Hi Mario, in many applications there is not much difference between logistic and Gaussian distributions (just as logit and probit models often produce similar fits)... Moreover it's possible to fit sigmoidal curves using models such as the (log-)logistic where the lower and/upper limits are esti

Re: [R] psychometric functions

2008-08-21 Thread Jonathan Baron
> > >>> > -Original Message- > > >>> > From: [EMAIL PROTECTED] > > >>> > [mailto:[EMAIL PROTECTED] On Behalf Of Mario Maiworm > > >>> > Sent: Thursday, August 21, 2008 7:05 AM > > >>> > To:

Re: [R] psychometric functions

2008-08-21 Thread Doran, Harold
uses optim() > -Original Message- > From: [EMAIL PROTECTED] > [mailto:[EMAIL PROTECTED] On Behalf Of Mario Maiworm > Sent: Thursday, August 21, 2008 9:16 AM > To: r-help@r-project.org > Subject: Re: [R] psychometric functions > > Thank you harold. Hmm thats bad news

Re: [R] psychometric functions

2008-08-21 Thread Mario Maiworm
l Message- >>> From: Doran, Harold [mailto:[EMAIL PROTECTED] >>> Sent: Thursday, August 21, 2008 2:40 PM >>> To: Mario Maiworm; r-help@r-project.org >>> Subject: RE: [R] psychometric functions >>> >>> I am pretty certain a function for this model doe

Re: [R] psychometric functions

2008-08-21 Thread Dimitris Rizopoulos
in the ltm package. -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Mario Maiworm Sent: Thursday, August 21, 2008 7:05 AM To: r-help@r-project.org Subject: [R] psychometric functions Hi, I want to fit some psychophysical data with cumulative gaussians. Th

Re: [R] psychometric functions

2008-08-21 Thread Doran, Harold
nds to 1) and this is in the ltm package. > -Original Message- > From: [EMAIL PROTECTED] > [mailto:[EMAIL PROTECTED] On Behalf Of Mario Maiworm > Sent: Thursday, August 21, 2008 7:05 AM > To: r-help@r-project.org > Subject: [R] psychometric functions > &g

[R] psychometric functions

2008-08-21 Thread Mario Maiworm
Hi, I want to fit some psychophysical data with cumulative gaussians. There is quite a convenient toolbox for matlab called 'psignifit' (formerly known as 'psychofit'). It allows the lower bound of the sigmoid to vary slightly from zero, aswell as the upper bound to vary from one. with these two fr