Re: [R] phyper returning zero

2013-03-15 Thread Martin Maechler
> "eh" == elliott harrison > on Fri, 15 Mar 2013 08:52:36 + writes: eh> Hi, eh> I am attempting to use phyper to test the significance eh> of two overlapping lists. I keep getting a zero and eh> wondered if that was determining non-significance of my eh> overla

Re: [R] phyper returning zero

2013-03-15 Thread elliott harrison
Thanks Michael I assumed as much but we know what that did. Thanks again. Elliott -Original Message- From: R. Michael Weylandt [mailto:michael.weyla...@gmail.com] Sent: 15 March 2013 09:29 To: elliott harrison Cc: r-help@r-project.org Subject: Re: [R] phyper returning zero On Fri, Mar

Re: [R] phyper returning zero

2013-03-15 Thread R. Michael Weylandt
On Fri, Mar 15, 2013 at 8:52 AM, elliott harrison wrote: > Hi, > I am attempting to use phyper to test the significance of two overlapping > lists. I keep getting a zero and wondered if that was determining > non-significance of my overlap or a p-value too small to calculate? > > overlap = 524 >

[R] phyper returning zero

2013-03-15 Thread elliott harrison
Hi, I am attempting to use phyper to test the significance of two overlapping lists. I keep getting a zero and wondered if that was determining non-significance of my overlap or a p-value too small to calculate? overlap = 524 lista = 2784 totalpop = 54675 listb = 1296 phyper(overlap, lista, tot