Re: [R] network package in R

2011-05-28 Thread Steve Lianoglou
Hi again, On Sat, May 28, 2011 at 1:03 PM, Weiwei Shi wrote: > Actually I have another question relating to this, > > I have about 300 nodes (I can reduced them somehow if the network is too > messy) and the similarity matrix between any two nodes. The size and color > of nodes have some meanings

Re: [R] network package in R

2011-05-28 Thread Weiwei Shi
Actually I have another question relating to this, I have about 300 nodes (I can reduced them somehow if the network is too messy) and the similarity matrix between any two nodes. The size and color of nodes have some meanings and I tried to use the layout to show their "distance". Here is the qu

Re: [R] network package in R

2011-05-28 Thread Weiwei Shi
Thank you, Steve. Initially I tried to choose b/w cytoscape and pajek, among other bunch of software. I did not realize the existence of RCytoscape; otherwise, I would probably use that one. Weiwei On Sat, May 28, 2011 at 9:25 AM, Steve Lianoglou < mailinglist.honey...@gmail.com> wrote: > Hi, >

Re: [R] network package in R

2011-05-28 Thread Steve Lianoglou
Hi, On Fri, May 27, 2011 at 5:32 PM, Weiwei Shi wrote: > Hi there, > > I need a network builder and it can change the node size and color; I am not > sure if network package in R can do this or not. The other functions I > wanted have been found in that package. > > BTW, if there is another packa

Re: [R] network package in R

2011-05-28 Thread Wincent
Can you be more specific about what a network builder is? and what do you want exactly? Your question seems a bit vague. Best Ronggui On 28 May 2011 05:32, Weiwei Shi wrote: > Hi there, > > I need a network builder and it can change the node size and color; I am > not > sure if network package

Re: [R] network package in R

2011-05-27 Thread Shi, Tao
iwei Shi > To: "r-h...@stat.math.ethz.ch" > Sent: Fri, May 27, 2011 2:32:23 PM > Subject: [R] network package in R > > Hi there, > > I need a network builder and it can change the node size and color; I am not > sure if network package in R can do this or not.

Re: [R] network package in R

2011-05-27 Thread David Winsemius
On May 27, 2011, at 7:08 PM, Weiwei Shi wrote: > Please read my post carefully. > > I did search and found some functions I need for my purpose from > network package, like layout and its different algorithm. I used > pajek a couple of days and I found the "IO" part between R and pajek > a

Re: [R] network package in R

2011-05-27 Thread Weiwei Shi
Please read my post carefully. I did search and found some functions I need for my purpose from network package, like layout and its different algorithm. I used pajek a couple of days and I found the "IO" part between R and pajek a little inconvenient; that's why I sent the question to find if net

Re: [R] network package in R

2011-05-27 Thread David Winsemius
On May 27, 2011, at 5:32 PM, Weiwei Shi wrote: Hi there, I need a network builder and it can change the node size and color; I am not sure if network package in R can do this or not. The other functions I wanted have been found in that package. When I type ??network at my console I get p

[R] network package in R

2011-05-27 Thread Weiwei Shi
Hi there, I need a network builder and it can change the node size and color; I am not sure if network package in R can do this or not. The other functions I wanted have been found in that package. BTW, if there is another package in R relating to this, please suggest too. Thanks, Weiwei -- W

[R] -network- package in R: removing nodes

2010-04-28 Thread Rick L
Dear all, If you have experience with the -network- package, can you show me how to remove nodes based on their degrees? For instance, removing all nodes with an out-degree or in-degree of 1? Thank you very much for your help! Rick __ R-help@r-p

[R] -network- package in R: removing nodes

2010-04-27 Thread Rick L
Dear all, If you have experience with the -network- package, can you show me how to remove nodes based on their degrees? For instance, removing all nodes with an out-degree or in-degree of 1? Thank you very much for your help! Rick __ R-help@r-pro