Redhat's Security Enhanced Linux (in some modes)
generates messages like that when code in a shared library
is not compiled to have position independent code.
I.e., the -fpic or -fPIC flag was not supplied when
compiling. Your build log showed that -fpic was used
when compiling your code, but the
Bala,
I would not advocate disabling SELinux entirely to resolve this issue.
SELinux is one of the key security features of Fedora Linux and some
other Linux distributions that have adopted it. It has already been
demonstrated to be robust with respect to so-called zero-day attacks.
I wou
Dear Marc and Peter,
Thank you so much. In fact disabling the SElinux solved the problem.
Bala
On Tue, Apr 21, 2009 at 4:43 PM, Marc Schwartz wrote:
>
> On Apr 21, 2009, at 9:28 AM, Peter Dalgaard wrote:
>
> Bala subramanian wrote:
>>
>>> Hi,
>>> I tried to install from four different mirror
On Apr 21, 2009, at 9:28 AM, Peter Dalgaard wrote:
Bala subramanian wrote:
Hi,
I tried to install from four different mirrors. The result is the
same. I
dnt understand what the following error means.
/usr/lib/R/library/ncdf/libs/ncdf.so: cannot restore segment prot
after
reloc: Permissio
Bala subramanian wrote:
> Hi,
> I tried to install from four different mirrors. The result is the same. I
> dnt understand what the following error means.
> /usr/lib/R/library/ncdf/libs/ncdf.so: cannot restore segment prot after
> reloc: Permission denied
> Error in library(ncdf) : .First.lib faile
Hi,
In install.packages, there is something called *lib* which says,
lib: character vector giving the library directories where to install the
packages. Recycled as needed. If missing, defaults to '.libPaths()[1]'.
If i have to give the lib option as an arguement, what should be the path
for th
Hi,
I tried to install from four different mirrors. The result is the same. I
dnt understand what the following error means.
/usr/lib/R/library/ncdf/libs/ncdf.so: cannot restore segment prot after
reloc: Permission denied
Error in library(ncdf) : .First.lib failed for 'ncdf'
I even tried to change
Try to install from scratch from a different mirror.
Dimitri
On Tue, Apr 21, 2009 at 6:21 AM, Bala subramanian
wrote:
> Hi,
> Yes ncdf needs netcdf, netcdf is already installed in my fedora10. I
> reinstalled ncdf with the following option
>>install.packages('ncdf',dep=TRUE)
>>library(ncdf)> libr
Hi,
Yes ncdf needs netcdf, netcdf is already installed in my fedora10. I
reinstalled ncdf with the following option
>install.packages('ncdf',dep=TRUE)
>library(ncdf)> library(ncdf)
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared library '/usr/lib/R/library/ncdf/libs/ncdf.s
On Tue, Apr 21, 2009 at 11:57 AM, Bala subramanian
wrote:
> Dear Simon,
> I installed the ncdf package in the way you suggested but still i got the
> same error i got before. I haves pasted below the installation log and
> errors.
>
Does ncdf depend on netcdf [1]? If so, perhaps it is missing, or
2. then call the package using "library(name of the package)"
>
> It helps to know where your R library directory is on your computer.
>
> HTH Simon.
>
>
> - Original Message - From: "Bala subramanian" <
> bala.biophys...@gmail.com>
> T
R library directory is on your computer.
HTH Simon.
- Original Message -
From: "Bala subramanian"
To:
Sent: Tuesday, April 21, 2009 9:34 AM
Subject: [R] joined R-today
Friends,
I am a newbie to R. Just installed and started with R. I installed netcdf
library (netcdf-4.0
Friends,
I am a newbie to R. Just installed and started with R. I installed netcdf
library (netcdf-4.0.tar.gz) and then ncdf package of R from CRAN with the
following command.
R CMD INSTALL
--configure-args="-with-netcdf_incdir=/usr/local/netcdf/include
-with-netcdf_libdir=/usr/local/netcdf/lib"
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