Re: [R] errors with compilation

2008-12-09 Thread Prof Brian Ripley
On Tue, 9 Dec 2008, Jason Tan wrote: thanks. i noticed a syntax error. a missing semi colon. Which, as I said, was corrected weeks ago. any idea about the error below? Yes: you need to ensure that dynamic libraries are used on x86_64 Linux. That's something specific to your setup: standar

[R] errors with compilation

2008-12-09 Thread Jason Tan
Hi, i'm trying to compile R on a Cray XT3 using pgi/7.2.1 - CNL (compute node linux) The R version is 2.8.0 this is the option -enable-R-static-lib=yes --disable-R-shlib CPICFLAGS=fpic FPICFLAGS=fpic CXXPICFLAGS=fpic SHLIB_LDFLAGS=shared --with-x=no SHLIB_CXXLDFLAGS=shared --disable-BLAS-shli

Re: [R] errors with compilation

2008-12-08 Thread Jason Tan
thanks. i noticed a syntax error. a missing semi colon. any idea about the error below? cc -I. -I../../../src/include -I../../../src/include -I/usr/local/ include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rsock.c -o Rsock.o /opt/cray/xt-asyncpe/1.2/bin/cc: INFO: linux target is being used cc -I. -I.

Re: [R] errors with compilation

2008-12-08 Thread Prof Brian Ripley
Please try the R-patched.version of R (see the posting guide or the FAQ). That seems to be about an error in the R 2.8.0 sources that was corrected in October, and only happens if you do not ask for X11 support (which most R users need, including it seems all the pre-release testers). On Tue,

[R] errors with compilation

2008-12-08 Thread Jason Tan
Hi, i'm trying to compile R on a Cray XT3 using pgi/7.2.1 - CNL (compute node linux) The R version is 2.8.0 this is the option -enable-R-static-lib=yes --disable-R-shlib CPICFLAGS=fpic FPICFLAGS=fpic CXXPICFLAGS=fpic SHLIB_LDFLAGS=shared --with-x=no SHLIB_CXXLDFLAGS=shared --disable-BLAS-shli