Re: [R] contour plot axis correspondence

2013-11-16 Thread William Dunlap
[mailto:r-help-boun...@r-project.org] On > Behalf > Of ivo welch > Sent: Saturday, November 16, 2013 11:40 AM > To: r-help > Subject: [R] contour plot axis correspondence > > I am struggling with a contour plot. I want to place a cross over the > minimum. alas, I don&#x

[R] contour plot axis correspondence

2013-11-16 Thread ivo welch
I am struggling with a contour plot. I want to place a cross over the minimum. alas, I don't seem to be able to map axes appropriately. here is what I mean: N <- 1000 rm <- rnorm(N, mean=0.0, sd=0.4) rx <- rnorm(N, mean=0.0, sd=0.4) rt <- rnorm(N, mean=0.0, sd=0.4) exploss <- function(hdgM,hdg

Re: [R] contour plot help

2012-10-10 Thread David Winsemius
On Oct 10, 2012, at 7:58 AM, namrata mohapatra wrote: > Hello > > I am interested to plot a contour plot using the colour : rainbow , however I > want to reverse the order of the colour ( such that red represents max value > and blue min value) and also remove the lines in white in the plot .

Re: [R] Contour plot- repost message

2012-02-29 Thread David Winsemius
On Feb 29, 2012, at 7:08 PM, Leong Keat Chan wrote: Hi, I would like to make a contour plot using R with the following information (data at the end): x-axis= arranged according to day (from 1 to 365, labels= use I am really getting tired of seeing this message. This must be the fourth du

Re: [R] Contour plot- repost message

2012-02-29 Thread Leong Keat Chan
Hi, I would like to make a contour plot using R with the following information (data at the end): x-axis= arranged according to day (from 1 to 365, labels= use months; up to 365 days in one year), y-axis= depth (labels from 0 at the top to 7 at the bottom; this is a water depth profile), and z-a

Re: [R] Contour plot

2012-02-29 Thread Leong Keat Chan
Hi, I would like to make a contour plot using R with the following information (data at the end): x-axis= arranged according to day (from 1 to 365, labels= use months; up to 365 days in one year), y-axis= depth (labels from 0 at the top to 7 at the bottom; this is a water depth profile), and z-a

Re: [R] Contour plot

2012-02-29 Thread Leong Keat Chan
Hi, I would like to make a contour plot using R with the following information (data at the end): x-axis= arranged according to day (from 1 to 365, labels= use months; up to 365 days in one year), y-axis= depth (labels from 0 at the top to 7 at the bottom; this is a water depth profile), and z-a

Re: [R] Contour plot

2012-02-29 Thread lkchan
Hi, I would like to make a contour plot with the data below, x-axis= Day (increasing order, day number is out of 365 days of a year), y-axis= Depth (varies), and z=pH. I tried to use filled.contour function, but not sure the proper way to ordinate my z results into a matrix with different x and y l

Re: [R] Contour plot with messy field data.

2012-02-02 Thread chuck.01
This is ugly, but I think it works.: z.2 <- data.frame(data.interp[[3]]) diff_y <- unique(round(diff(data.interp[[2]]), 4)) diff_x <- unique(round(diff(data.interp[[1]]), 4)) total_area <- length(which(z.2!="NA"))*diff_y*diff_x # percent of total area less than -.5 (as I wanted) Per_neg_0.5 <- (

Re: [R] Contour plot with messy field data.

2012-02-02 Thread chuck.01
Ok, I've since found this: # called previously posted dataset "dat" attach(dat) library(akima) data.interp <- interp(x,y,z) contour(data.interp) any idea how to calculate area within specified contour lines? Thanks chuck.01 wrote > > Hello, > I have some data that will be in the form:

[R] Contour plot with messy field data.

2012-02-02 Thread chuck.01
Hello, I have some data that will be in the form: structure(list(station = structure(c(20L, 2L, 4L, 19L, 3L, 11L, 1L, 5L, 10L, 12L, 17L, 18L, 6L, 9L, 13L, 16L, 7L, 8L, 15L, 14L ), .Label = c("1", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "2", "3", "4", "5", "6", "7", "8", "9",

Re: [R] Contour plot on a triangular mesh

2012-01-21 Thread Jim Lemon
On 01/21/2012 09:38 PM, Roary wrote: Thanks for your responses Jason and Jim. The ternary plot is definitely the right style with the triangle fill. However, one of the important features (that perhaps I understated) is that X3 will have more categories than X1 and X2, therefore the triangular sh

Re: [R] Contour plot on a triangular mesh

2012-01-21 Thread Roary
Thanks for your responses Jason and Jim. The ternary plot is definitely the right style with the triangle fill. However, one of the important features (that perhaps I understated) is that X3 will have more categories than X1 and X2, therefore the triangular shape is not appropriate. If X1 has I cat

Re: [R] Contour plot on a triangular mesh

2012-01-21 Thread Jim Lemon
On 01/20/2012 11:28 PM, Roary wrote: Hi All, I have 3 variables which present a perfect linear dependency such that the third is the sum of the first two. I have an ordinary 2D contour plot on a square grid with the first two variables forming the axes and the third naturally being the diagonals

Re: [R] Contour plot on a triangular mesh

2012-01-20 Thread Jason Edgecombe
I'm not sure if this is appropriate. If the sum of your variables is always the same constant, then you might try a Ternary plot ( http://en.wikipedia.org/wiki/Ternary_plot ). The "vcd" package can make ternary plots. On 01/20/2012 02:56 PM, Roary wrote: I have two observed categorical variab

Re: [R] Contour plot on a triangular mesh

2012-01-20 Thread Roary
I have two observed categorical variables X1 and X2, with X3=X1+X2, and a continuous response Y. I can interpolate the surface and construct an ordinary 2D square contour plot (with X1,X2 axes and X3 on the diagonal). However, I would like to change the orientation of the plot so that the axes fit

Re: [R] Contour plot on a triangular mesh

2012-01-20 Thread Uwe Ligges
Not sure if I understand the question: If you have more data the grid produced by image() or contour() will be finer anyway... Perhaps we just need an example what you are actually asking for. Uwe Ligges On 20.01.2012 13:28, Roary wrote: Hi All, I have 3 variables which present a perfect lin

[R] Contour plot on a triangular mesh

2012-01-20 Thread Roary
Hi All, I have 3 variables which present a perfect linear dependency such that the third is the sum of the first two. I have an ordinary 2D contour plot on a square grid with the first two variables forming the axes and the third naturally being the diagonals. From an interpretive point of view it

[R] Contour plot with time on both X-axis (day) and on Y-axis (hours)

2011-01-13 Thread Xavier Bodin
Hello all, I'd like to graphically represent an hourly temperature timeseries ( http://r.789695.n4.nabble.com/file/n3215785/data.csv data.csv , and see below for pre-process of the data) with the R functions image + contour. To do that I wrote that script : http://r.789695.n4.nabble.com/file/n32

[R] Contour plot with time on X-axis (day) and Y-axis (hours)

2011-01-07 Thread xbodin
Hello all, I'd like to graphically represent an hourly temperature timeseries ( http://r.789695.n4.nabble.com/file/n3179098/data.csv data.csv , and see below for pre-process of the data) with the R functions image + contour. To do that I wrote that script ( http://r.789695.n4.nabble.com/file/n317

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-25 Thread David Winsemius
On Oct 25, 2010, at 3:41 AM, Lorenzo Isella wrote: On 10/25/2010 01:32 AM, David Winsemius wrote: You were advised to look at rms. Why have you dismissed this suggestion? Using your data setup below and packaging into a dataframe. require(rms) ddf <- datadist(xysf <- as.data.frame(xys)) ol

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-25 Thread Lorenzo Isella
On 10/25/2010 01:32 AM, David Winsemius wrote: You were advised to look at rms. Why have you dismissed this suggestion? Using your data setup below and packaging into a dataframe. require(rms) ddf <- datadist(xysf <- as.data.frame(xys)) olsfit <- ols(V3~rcs(V1,3)+rcs(V2,3), data=xysf) bounds <

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-25 Thread Jim Lemon
On 10/25/2010 03:30 AM, Lorenzo Isella wrote: Hello, I feel I am drowning in a glass of water. Consider the following snippet at the end of the email, where I generated a set of {x,y,s=f(x,y)} values, i.e. a set of 2D coordinates + a scalar on a circle. Now, I can get a scatterplot in 3D, but ho

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread David Winsemius
On Oct 24, 2010, at 9:30 AM, Lorenzo Isella wrote: Hi, And thanks for helping. I am anyway a bit puzzled, since case (1) is not only a matter of interpolation. Probably the point I did not make clear (my fault) is that case (1) in my original email does not refer to an irregular grid o

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread Lorenzo Isella
Hi, And thanks for helping. I am anyway a bit puzzled, since case (1) is not only a matter of interpolation. Probably the point I did not make clear (my fault) is that case (1) in my original email does not refer to an irregular grid on a rectangular domain; the set of (x,y) coordinate could sta

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread David Winsemius
On Oct 24, 2010, at 6:12 AM, Lorenzo Isella wrote: As to the domain of the function, at least in case (1), that should arise from the collected data points in (x,y) if the sampling is dense enough. And that is precisely what you get from the perimeter function. The earlier Design packag

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread Lorenzo Isella
On 10/24/2010 02:55 PM, David Winsemius wrote: On Oct 24, 2010, at 4:30 AM, Lorenzo Isella wrote: Dear All, I would like to plot a scalar (e.g. a temperature) on a non-rectangular domain (or even better: I would simply like to be able to draw a contour plot on an arbitrary 2D domain). I wonder

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread David Winsemius
On Oct 24, 2010, at 4:30 AM, Lorenzo Isella wrote: Dear All, I would like to plot a scalar (e.g. a temperature) on a non- rectangular domain (or even better: I would simply like to be able to draw a contour plot on an arbitrary 2D domain). I wonder if there is any tool to achieve that with

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread Uwe Ligges
On 24.10.2010 14:14, Lorenzo Isella wrote: On 10/24/2010 01:51 PM, (Ted Harding) wrote: On 24-Oct-10 11:30:57, Lorenzo Isella wrote: Dear All, I would like to plot a scalar (e.g. a temperature) on a non-rectangular domain (or even better: I would simply like to be able to draw a contour plot

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread Lorenzo Isella
On 10/24/2010 01:51 PM, (Ted Harding) wrote: On 24-Oct-10 11:30:57, Lorenzo Isella wrote: Dear All, I would like to plot a scalar (e.g. a temperature) on a non-rectangular domain (or even better: I would simply like to be able to draw a contour plot on an arbitrary 2D domain). I wonder if there

Re: [R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread Ted Harding
On 24-Oct-10 11:30:57, Lorenzo Isella wrote: > Dear All, > I would like to plot a scalar (e.g. a temperature) on a non-rectangular > domain (or even better: I would simply like to be able to draw a > contour plot on an arbitrary 2D domain). I wonder if there is any > tool to achieve that with R. I

[R] Contour Plot on a non Rectangular Grid

2010-10-24 Thread Lorenzo Isella
Dear All, I would like to plot a scalar (e.g. a temperature) on a non-rectangular domain (or even better: I would simply like to be able to draw a contour plot on an arbitrary 2D domain). I wonder if there is any tool to achieve that with R. I did some online search in particular on the list a

[R] Contour Plot - water bodies

2010-09-23 Thread G.ARUN KUMAR
Hi All I have been trying to plot irregular XYZ data on world / country map, where X and Y are llongitude and latitude coordinates and Z is a variable. My problem is I get contour lines over water bodies. The method I follow is:> library(akima)> library(maps)> library(mapdata)> library(gpclib)>

[R] contour plot

2009-08-20 Thread FMH
Hi, Could someone give some ideas on plotting a contour by using geoR package, please? Thank you Kagba [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do r

Re: [R] contour plot

2009-07-23 Thread ONKELINX, Thierry
04 Aan: David Winsemius CC: r-help@r-project.org Onderwerp: Re: [R] contour plot That problem is that for every y I get a different x and thus cant create an array as in the help page examples. I was just wondering, whether there is a possibility to create such a contour plot easily without hav

Re: [R] contour plot

2009-07-23 Thread Petr PIKAL
Hi maybe package akima with function interp can help you Regards Petr r-help-boun...@r-project.org napsal dne 23.07.2009 11:04:25: > That problem is that for every y I get a different x and thus cant > create an array as in the help page examples. > I was just wondering, whether there is a poss

Re: [R] contour plot

2009-07-23 Thread axionator
That problem is that for every y I get a different x and thus cant create an array as in the help page examples. I was just wondering, whether there is a possibility to create such a contour plot easily without having to spend too much time with setting up a suitable matrix manually. Armin __

Re: [R] contour plot

2009-07-22 Thread David Winsemius
On Jul 22, 2009, at 10:17 AM, axionator wrote: Hi, I want to draw a contour plot of the following function: z = y*x + epsilon, where x ~ N(y, 1) and epsilon ~ N(0, sigma) with sigma fixed (e.g. 1) But didnt manage to feed "contour" with the right input. Thanks for your help. Armin The hel

[R] contour plot

2009-07-22 Thread axionator
Hi, I want to draw a contour plot of the following function: z = y*x + epsilon, where x ~ N(y, 1) and epsilon ~ N(0, sigma) with sigma fixed (e.g. 1) But didnt manage to feed "contour" with the right input. Thanks for your help. Armin __ R-help@r-pro

Re: [R] contour plot or persp plot with log scale?

2009-02-12 Thread Duncan Murdoch
On 2/12/2009 12:04 PM, Gilbert Brenes wrote: Hi. Is it possible to draw a contour plot (with contour or filled contour) or a a surface plot (with persp or persp3d) with the z axis in a log scale? For persp or persp3d I think you'd have to do the log transformation yourself. For example, x

Re: [R] contour plot or persp plot with log scale?

2009-02-12 Thread Uwe Ligges
Gilbert Brenes wrote: Hi. Is it possible to draw a contour plot (with contour or filled contour) or a a surface plot (with persp or persp3d) with the z axis in a log scale? At least for contour(), you can specify logarithmic breaks. Best, Uwe Ligges Gilbert ___

[R] contour plot or persp plot with log scale?

2009-02-12 Thread Gilbert Brenes
Hi. Is it possible to draw a contour plot (with contour or filled contour) or a a surface plot (with persp or persp3d) with the z axis in a log scale? Gilbert __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE d

Re: [R] contour plot - smooth lines

2008-12-27 Thread Uwe Ligges
tommaso.lette...@unifi.it wrote: Dear R-Users, I am using 'contour' to plot a graph using values x,y and a matrix z. I would like to obtain 'smooth lines' instead of no-smooth contour lines. I tried with filled.contour too. In a Post I found yy <-predict(interpSpline(x, y)) I could use that met

[R] contour plot - smooth lines

2008-12-27 Thread tommaso . letterio
Dear R-Users, I am using 'contour' to plot a graph using values x,y and a matrix z. I would like to obtain 'smooth lines' instead of no-smooth contour lines. I tried with filled.contour too. In a Post I found yy <-predict(interpSpline(x, y)) I could use that method for each range that I want to pl

Re: [R] contour plot, failing to interpolate through all data

2008-11-04 Thread Dieter Menne
Folkes, Michael dfo-mpo.gc.ca> writes: > I'm having trouble making contour lines for this attached, sparse > dataset (low data:NA ratio!). Is it the high number of NA's, or funny > layout of the densities, or something else that's causing this? > > start data to be in file='testmatrix.csv

[R] contour plot, failing to interpolate through all data

2008-11-04 Thread Folkes, Michael
I'm having trouble making contour lines for this attached, sparse dataset (low data:NA ratio!). Is it the high number of NA's, or funny layout of the densities, or something else that's causing this? This is a subsample of the dataset, and I get the same problem when using the full data. The only

Re: [R] Contour Plot Aspect Ratio

2008-10-03 Thread Sam Albers
So I managed to solve this for myself in a very roundabout kind of way. So I figured that I should share in case anyone else needed something like this. filled.contour(contour, axes=F, frame.plot=F, color=terrain.colors, ylab= "", key.title = title(main="Velocity\n(m/s)"),asp=2, key.axes = axis(4,

Re: [R] Contour Plot Aspect Ratio

2008-10-03 Thread Greg Snow
] 801.408.8111 > -Original Message- > From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] > project.org] On Behalf Of Sam Albers > Sent: Thursday, October 02, 2008 2:02 PM > To: r-help@r-project.org > Subject: [R] Contour Plot Aspect Ratio > > Hello there, > > I have a

[R] Contour Plot Aspect Ratio

2008-10-02 Thread Sam Albers
Hello there, I have a fairly simple request (I hope!) I have produced a filled contour plot like this: library(grDevices) library(gplots) library(plotrix) filled.contour(contour, axes=F, frame.plot=TRUE, color=terrain.colors, ylab= "Length Along Flume (m)", key.title = title(main="Velocity\n(m/

Re: [R] contour plot - line passing through z values

2008-06-19 Thread Duncan Murdoch
On 6/19/2008 12:51 PM, Jehol wrote: Dear all, there is much in these forums about adding a line to a contour/filled.contour plot, but I haven't found hints for the following. I apologize in advance if I just missed the right one. I'm having a standard filled.contour plot to which I want to add a

[R] contour plot - line passing through z values

2008-06-19 Thread Jehol
Dear all, there is much in these forums about adding a line to a contour/filled.contour plot, but I haven't found hints for the following. I apologize in advance if I just missed the right one. I'm having a standard filled.contour plot to which I want to add a line passing through some specific z

Re: [R] Contour plot (level curves)

2007-10-05 Thread Eric Elguero
> I have a sample of n values from a bivariate distribution (from a MCMC > procedure). How could I draw a contour plot of "the joint density" based on > that sample ? here is a fast 2D density estimator. Not very sophisticated, but works. The function assumes that data are in the form of a matrix

Re: [R] Contour plot (level curves)

2007-10-04 Thread hadley wickham
On 10/4/07, Prof Brian Ripley <[EMAIL PROTECTED]> wrote: > On Thu, 4 Oct 2007, Caio Azevedo wrote: > > > Hi all, > > > > I have a sample of n values from a bivariate distribution (from a MCMC > > procedure). How could I draw a contour plot of "the joint density" based on > > that sample ? > > You n

Re: [R] Contour plot (level curves)

2007-10-04 Thread Prof Brian Ripley
On Thu, 4 Oct 2007, Caio Azevedo wrote: > Hi all, > > I have a sample of n values from a bivariate distribution (from a MCMC > procedure). How could I draw a contour plot of "the joint density" based on > that sample ? You need to estimate the density, and contour that estimate. MASS has exampl

[R] Contour plot (level curves)

2007-10-04 Thread Caio Azevedo
Hi all, I have a sample of n values from a bivariate distribution (from a MCMC procedure). How could I draw a contour plot of "the joint density" based on that sample ? Sorry if I was not too clear. Thans in advance, Regards, Caio [[alternative HTML version deleted]]