Bogdan,
I would look into bioconductor for packages handling this type choromosomal
range data. cntools is one poped into my mind.
Tao
On Thursday, September 24, 2015 12:59 PM, Sarah Goslee
wrote:
merge() most likely, but: are these really lists in the R sense?
The correct answer depe
Dear Bert and Sarah, thank you for your suggestions. Yes, I came across
"dplyr" that has a few functions already implemented, thanks again !
On Thu, Sep 24, 2015 at 1:17 PM, Bert Gunter wrote:
> Also, in addition to what Sarah told you, have you checked on the
> Bioconductor site, as this sounds
Also, in addition to what Sarah told you, have you checked on the
Bioconductor site, as this sounds like the sort of thing that they may
well have something for already.
... and you've posted here often enough that you shouldn't still be
posting HTML and you should know about toy examples!
Cheers
merge() most likely, but: are these really lists in the R sense?
The correct answer depends on what the format actually is; you need to
use dput() or some other unambiguous way of providing sample data.
Without a reproducible example that includes some sample data provided
using dput() (fake is f
Dear all,
please could you advise on a computationally quick way to compare and merge
2 long lists in R;
the lists are of the following type, for example :
<> in list 1 :
chromosome, coordinateA, coordinateB, value1
chromosome, coordinateC, coordinateC, value2,
etc
<> in list 2 :
chromosome, c
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