Re: [R] ask help for ggplot

2020-06-05 Thread Aimin Yan
Thank you, it is very helpful. I tried the following way to generate stacked bar plot for trt 'M6' and 'M12' However, the label position of legend in 'M12' is not what I want, actually in the legend I also want to keep "Others" in the bottom(like the gene order in stacked bar) In addition, how t

Re: [R] ask help for ggplot

2020-06-05 Thread Rui Barradas
Hello, Something like this? g <- unique(as.character(df$gene)) i <- which(g == "Others") g <- c(g[i], g[-i]) df$trt <- factor(df$trt,levels=unique(as.character(df$trt))) df$gene <- factor(df$gene,levels = g) ggplot(df, aes(x=trt,y=freq, fill = gene, group = gene)) + geom_bar(stat = "identity

Re: [R] ask help for ggplot

2020-06-04 Thread Aimin Yan
Is there possible to generate a barplot in the following link using ggplot? https://photos.app.goo.gl/E3MC461dKaTZfHza9 here is what I did library(ggplot2) df <- read.csv(text= "trt,gene,freq,cols M6,ALDH16A1,100.000,red M6,Others,0.000,lightgrey M12,ALDH16A1,64.6638015,red M12,GBE1,2.0

Re: [R] ask help for ggplot

2020-06-04 Thread Jeff Newmiller
Better read the Posting Guide mentioned in the footer of this and every email on this list. Attachments can only be among a very few file types and still be passed through... yours did not. As for your question, it is very likely that the answer is yes, though since this list is about the R lan

[R] ask help for ggplot

2020-06-04 Thread Aimin Yan
I have a question about using ggplot. Is there possible to generate a barplot like the attached file using ggplot? Thank you, Aimin __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE

Re: [R] ask help!

2013-07-25 Thread Prof Brian Ripley
No R version was stated, but this is not the behaviour of R-patched so you could update. On 25/07/2013 11:01, Jim Lemon wrote: On 07/25/2013 07:44 PM, mei_yuan wrote: Hi, In the R console, I have the following: runif(10) Error in runif(10) : '.Random.seed' is not an integer vector but o

Re: [R] ask help!

2013-07-25 Thread Helios de Rosario
-- Helios de Rosario Martínez Researcher >>> El día 25/07/2013 a las 11:44, "mei_yuan" escribió: > Hi, > > In the R console, I have the following: > >> runif(10) > Error in runif(10) : > '.Random.seed' is not an integer vector but of type 'list' It seems you have overwritten the defaul

Re: [R] ask help!

2013-07-25 Thread Jim Lemon
On 07/25/2013 07:44 PM, mei_yuan wrote: Hi, In the R console, I have the following: runif(10) Error in runif(10) : '.Random.seed' is not an integer vector but of type 'list' Can someone advise me of the solution of the problem? Mei-Yuan Chen Hi Mei-Yuan, .Random.seed should be a

[R] ask help!

2013-07-25 Thread mei_yuan
Hi, In the R console, I have the following: > runif(10) Error in runif(10) : '.Random.seed' is not an integer vector but of type 'list' > Can someone advise me of the solution of the problem? Mei-Yuan Chen Department of Finance NCHU, aiwan __

[R] ask help

2013-04-07 Thread DONG Echo
Hi, if I have a data such that, type otu1 otu2 otu3 otu4 otu5 sampleA A1 23 4 56 sampleA A2 14 9 32 sampleB B1 36 1 45 sampleB B2 45 3 43 I want to make a heatmap that A1 and A2 are clusted in sampleA and B1 and B2 a

Re: [R] Ask help

2013-04-03 Thread Jim Lemon
On 04/04/2013 01:31 AM, DONG Echo wrote: Hello! I am eager to learn if I only have a data about the relationship between otu and sample, could I use the function capscale, and final make a point plot that x-axis is CAP1 and y-axis is CAP2? Besides, what function could I use to make the dif

[R] Ask help

2013-04-03 Thread DONG Echo
Hello! I am eager to learn if I only have a data about the relationship between otu and sample, could I use the function capscale, and final make a point plot that x-axis is CAP1 and y-axis is CAP2? Besides, what function could I use to make the different rarefaction curve with different colo

Re: [R] ask help about boxplot , different list variation into the tick of x-axis?

2009-07-30 Thread John Kane
x(rnorm(60, 25, 5),ncol=5), years)) library(reshape) newdata <- (melt(mydata, id=c("years"))) boxplot(value~years, data=newdata) #== --- On Thu, 7/30/09, John Kane wrote: > From: John Kane > Subjec

Re: [R] ask help about boxplot , different list variation into the tick of x-axis?

2009-07-30 Thread John Kane
ct: [R] ask help about boxplot , different list variation into the tick > of x-axis? > To: r-help@r-project.org > Received: Thursday, July 30, 2009, 5:54 PM > Hi ,everyone. > > I want to draw a boxplot figure, main script shown as > below. when I > run the command "bo

[R] ask help about boxplot , different list variation into the tick of x-axis?

2009-07-30 Thread Jie TANG
Hi ,everyone. I want to draw a boxplot figure, main script shown as below. when I run the command "boxplot(bjavee~yearname)",it is wrong with the error information " model.frame.default(formula = bjavee ~ yearname) : variation 'bjavee' list is wrong". I want to add the yearname as the x-axis t