Re: [R] When scale is applied in heatmap

2013-08-05 Thread David Carlson
@r-project.org Subject: [R] When scale is applied in heatmap When clustering I would do something like plot(hclust(dist(scale(X In case of heatmap and heatmap.2 it seems to me that for the dendrograms plot(hclust(dist(X))) is done while for the heatmap image(scale(X)) is done. I would say

[R] When scale is applied in heatmap

2013-08-05 Thread Witold E Wolski
When clustering I would do something like plot(hclust(dist(scale(X In case of heatmap and heatmap.2 it seems to me that for the dendrograms plot(hclust(dist(X))) is done while for the heatmap image(scale(X)) is done. I would say this is a bug however, because this is consistent among the h