Re: [R] Variability Plot For Toray Microarray Data

2013-01-28 Thread Jim Lemon
On 01/28/2013 09:42 PM, Peverall Dubois wrote: Is there any package that allow you to perform "MA plot" like graph for Toray microarray data? Unlike Affymetrix CEL file which contain 2 values (R and G), Torray raw data only contain 1 value. MA-plot is Affymetrix specific which usually availabl

Re: [R] Variability Plot For Toray Microarray Data

2013-01-28 Thread Bert Gunter
Wrong list! You want Bioconductor. -- Bert On Mon, Jan 28, 2013 at 2:42 AM, Peverall Dubois wrote: > Is there any package that allow you to perform "MA plot" like graph > for Toray microarray data? > > > Unlike Affymetrix CEL file which contain 2 values (R and G), > Torray raw data only contain

[R] Variability Plot For Toray Microarray Data

2013-01-28 Thread Peverall Dubois
Is there any package that allow you to perform "MA plot" like graph for Toray microarray data? Unlike Affymetrix CEL file which contain 2 values (R and G), Torray raw data only contain 1 value. MA-plot is Affymetrix specific which usually available for in (limma) package. P. Dubois [