Re: [R] Using the mantel test in Ape Package

2012-03-15 Thread Sarah Goslee
04, 156, 501, 224, 219, 561, 580, 139, > 257, 188, 123, 172, 148, 574, 169, 0, 539, 170, 136, 132, 135, > 897, 157, 502, 501, 508, 938, 701, 543, 702, 527, 598, 573, 501, > 476, 551, 483, 538, 520, 523, 506, 482, 503, 615, 473, 480, 517, > 707, 481, 551, 591, 544, 592, 516, 479, 493,

Re: [R] Using the mantel test in Ape Package

2012-03-15 Thread Dorothea Hill
952, 935, 855, 844, 909, 831, 894, 852, 851, 868, 832, 859, 951, 831, 836, 883, 1069, 841, 887, 927, 890, 922, 850, 837, 861, 746, 897, 904, 768, 821, 828, 954, 909, 838, 851, 872, 1271, 876, 897, 1256, 847, 853, 845, 826, 0, 886, 142, 123, 106, 552, 313, 161, 296, 141, 194, 193, 95, 94, 165,

Re: [R] Using the mantel test in Ape Package

2012-03-15 Thread Sarah Goslee
115 185  81  92 131 > 2  111   0  89  533  288 134  293 116 191 170  96  65 134  68 125 123 122 101 >  69  94 192  58  71 106 > 3  118  89   0  532  293 131  284 115 188 167  77  70 137  73 110 128 115  82 >  72  87 209  57  70 117 > 4  552 533 532    0  733 571  730 559 634 593 5

Re: [R] Using the mantel test in Ape Package

2012-03-14 Thread Sarah Goslee
Hi, On Wed, Mar 14, 2012 at 2:21 PM, Dorothea Hill wrote: > Hi, > > I am trying to use a mantel test on two distance matrices. The code I have > entered for each is: > > Gen_dists <- read.csv(file.choose(), >                                                stringsAsFactors = FALSE, >            

[R] Using the mantel test in Ape Package

2012-03-14 Thread Dorothea Hill
Hi, I am trying to use a mantel test on two distance matrices. The code I have entered for each is: Gen_dists <- read.csv(file.choose(), stringsAsFactors = FALSE, na.strings = c(" "),