Re: [R] Surprising behavior and bugs in R 4.0.4

2021-03-20 Thread Jiefei Wang
t;> >> Error: could not find function "api_create" >> >> Execution halted >> >> Warning message: >> >> In install.packages( >> https://cran.r-project.org/src/contrib/Archive/spatstat/spatstat_1.64-1.tar.gz, >> : >> >> install

Re: [R] Surprising behavior and bugs in R 4.0.4

2021-03-20 Thread Jiefei Wang
allation of package > ‘C:/Users/user/AppData/Local/Temp/RtmpWmLFdn/downloaded_packages/spatstat_1.64-1.tar.gz’ > had non-zero exit status > > > > Thanks, > > Miso > > *From:* Jiefei Wang > *Sent:* Sunday, March 21, 2021 1:05 AM > *To:* Miso Na > *Cc:* r

Re: [R] Surprising behavior and bugs in R 4.0.4

2021-03-20 Thread Eric Berger
I have no familiarity with these packages but I did a search in CRAN on api_create and found it is defined in the plotly package. I then confirmed that the seurat package does reference plotly. You might try installing the plotly package before trying to install seurat. HTH, Eric On Sat, Mar 20

Re: [R] Surprising behavior and bugs in R 4.0.4

2021-03-20 Thread Jiefei Wang
Hi Miso, Have you tried to install Seurat from CRAN? What you were using is the GitHub version of the package and has been actively updating, so the problem might be from the package. Best, Jiefei On Sat, Mar 20, 2021 at 10:32 PM Miso Na wrote: > Dear helpers, > > Although I uninstalled and re

Re: [R] Surprising behavior and bugs in R 4.0.4

2021-03-20 Thread Duncan Murdoch
On 20/03/2021 1:04 a.m., Miso Na wrote: Dear helpers, Although I uninstalled and reinstalled R more than 3 times to delete the error in api_create, it did not work. The error is representing on the very first page on R consol. Error: could not find function "api_create" Why would you think t

[R] Surprising behavior and bugs in R 4.0.4

2021-03-20 Thread Miso Na
Dear helpers, Although I uninstalled and reinstalled R more than 3 times to delete the error in api_create, it did not work. The error is representing on the very first page on R consol. Error: could not find function "api_create" I guess this error makes impossible to install library 'SCMAP',