Re: [R] Stress with MDS

2008-02-20 Thread Prof Brian Ripley
I presume this is isoMDS which is part of package MASS, support software for a book. The definitions of 'stress' are in that book, and the source code is part of the package. It makes no sense to use a metric definition of stress with a non-metric method of fitting: the original and fitted dis

[R] Stress with MDS

2008-02-20 Thread Montignies Francois
Hi, I am looking for the best multidimensional configuration for my data (47*47 distance matrix). I ve tried classical metric (cmdscale) and non metric MDS (isoMDS, nmds) but it is now difficult to choose the best solution because of the uncertainties in the definitions of the "stress" function.