Re: [R] Reproducible research

2010-09-09 Thread Max Kuhn
A Reproducible Research CRAN task view was recently created: http://cran.r-project.org/web/views/ReproducibleResearch.html I will be updating it with some of the information in this thread. thanks, Max On Thu, Sep 9, 2010 at 11:41 AM, Matt Shotwell wrote: > Well, the attachment was a dud

Re: [R] Reproducible research

2010-09-09 Thread Matt Shotwell
Well, the attachment was a dud. Try this: http://biostatmatt.com/R/markup_0.0.tar.gz -Matt On Thu, 2010-09-09 at 10:54 -0400, Matt Shotwell wrote: > I have a little package I've been using to write template blog posts (in > HTML) with embedded R code. It's quite small but very flexible and > ext

Re: [R] Reproducible research

2010-09-09 Thread Matt Shotwell
I have a little package I've been using to write template blog posts (in HTML) with embedded R code. It's quite small but very flexible and extensible, and aims to do something similar to Sweave and brew. In fact, the package is heavily influenced by the brew package, though implemented quite diffe

Re: [R] Reproducible research

2010-09-09 Thread Erik Iverson
Another vote for org-mode here. In addition the advantages the other posts mentioned, you get multiple export engines (html, latex, ...) all built in. On 09/09/2010 12:47 AM, David Scott wrote: I am investigating some approaches to reproducible research. I need in the end to produce .html or .d

Re: [R] Reproducible research

2010-09-09 Thread Vijayanpadmanabhan
Dear David I have tried odfWeave and I find it quite useful for the purpose. I would recommend you give it a try. It comes with simple example files along with installation. You might have some difficulty in getting the zip files and path configurations set, which is a pre-requisite, but I am sure

Re: [R] Reproducible research

2010-09-09 Thread Rainer M Krug
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 09/09/10 07:47, David Scott wrote: > I am investigating some approaches to reproducible research. I need in > the end to produce .html or .doc or .docx. I have used hwriter in the > past but have had some problems with verbatim output from R. Tabl

Re: [R] Reproducible research

2010-09-09 Thread David Hajage
Hello David, You could also have a look to the ascii package : http://eusebe.github.com/ascii/ With asciidoc (http://www.methods.co.nz/asciidoc/), or one of other markup languages supported (restructuredtext, txt2tags, or textile), you can obtain good results. For example, vignettes of the book "A

Re: [R] Reproducible research

2010-09-08 Thread Peng, C
FYI: If you use LaTex, you can work out on something between R and LaTex. -- View this message in context: http://r.789695.n4.nabble.com/Reproducible-research-tp2532353p2532361.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-

[R] Reproducible research

2010-09-08 Thread David Scott
I am investigating some approaches to reproducible research. I need in the end to produce .html or .doc or .docx. I have used hwriter in the past but have had some problems with verbatim output from R. Tables are also not particularly convenient. I am interested in R2HTML and R2wd in particu