Re: [R] Problem with RMA using limma, oligo and pdInfoBuilder packages

2012-03-20 Thread Marcin R
Dear Martin I just start to learn how analise microarray data by bioconductor. I use ragene.1.1.st.v1.v1 from affymetrix. I try to find some info in internet, but your example was the most useful for me . Now I done exacly this same witch tou descirbe and I got results file. I would like to than

Re: [R] Problem with RMA using limma, oligo and pdInfoBuilder packages

2009-01-27 Thread Martin Morgan
Anne-Marie Madore writes: > Hi, > > > > I am a Ph.D. student from Québec, Canada. I’m a beginner with R and > Bioconductor. Until now the only experience I have is in analyzing Please ask Bioconductor questions on the Bioconductor mailing list. http://bioconductor.org/docs/mailList.html Ma

[R] Problem with RMA using limma, oligo and pdInfoBuilder packages

2009-01-27 Thread Anne-Marie Madore
Hi, I am a Ph.D. student from Québec, Canada. I’m a beginner with R and Bioconductor. Until now the only experience I have is in analyzing microarray data using affy and limma packages. Now I am trying to analyze Rat Gene 10 st arrays and I would like to run RMA analysis and Smyth moderated t t