Re: [R] Overlapping Matrices By column correlation

Dear DR Jeff, OK! that is enough for me. There is no an alternative package that compares matrices as I want. Now I will develop one for me ;) Thanks, Ô__ c/ /'_;kmezhoud (*) \(*) ⴽⴰⵔⵉⵎ ⵎⴻⵣⵀⵓⴷ http://bioinformatics.tn/ On Fri, Jan 9, 2015 at 5:29 PM, Jeff Newmiller wrote: > Comparin

Re: [R] Overlapping Matrices By column correlation

Comparing anything requires some metric for comparison. Some metrics would be very easy, others not so easy. For example, you could simply give your mastic to the plot function to visually compare all columns. You are not being clear about what you want, so it is your communication that is "not

Re: [R] Overlapping Matrices By column correlation

Thanks David. It seems not easy to compare multiple Matrices. karim Ô__ c/ /'_;kmezhoud (*) \(*) ⴽⴰⵔⵉⵎ ⵎⴻⵣⵀⵓⴷ http://bioinformatics.tn/ On Thu, Jan 8, 2015 at 6:40 PM, David Winsemius wrote: > > On Jan 8, 2015, at 2:26 AM, Karim Mezhoud wrote: > > > Mantel test is interesting but it

Re: [R] Overlapping Matrices By column correlation

On Jan 8, 2015, at 2:26 AM, Karim Mezhoud wrote: > Mantel test is interesting but it can't displays wish columns are similar. > > Here an example: M >gene1 gene2 gene3 gene4 gene5 > Sample1 241 72 > Sample2

[R] Overlapping Matrices By column correlation

Mantel test is interesting but it can't displays wish columns are similar. Here an example: M gene1 gene2 gene3 gene4 gene5 Sample1 241 72 Sample2 0 NA2.3 19 Sampl